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Inhibition of no tail (ntl) gene expression in zebrafish by external guide sequence (EGS) technique.

作者信息

Pei De-Sheng, Sun Yong-Hua, Long Yong, Zhu Zuo-Yan

机构信息

State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China.

出版信息

Mol Biol Rep. 2008 Jun;35(2):139-43. doi: 10.1007/s11033-007-9063-9. Epub 2007 Feb 9.

DOI:10.1007/s11033-007-9063-9
PMID:17294249
Abstract

External guide sequence (EGS) technique, a branch of ribozyme strategy, can be enticed to cleave the target mRNA by forming a tRNA-like structure. In the present study, no tail gene (ntl), a key gene participating in the formation of normal tail, was used as a target for ribonuclease (RNase) P-mediated gene disruption in zebrafish in vivo. Transient expression of pH1-m3/4 ntl-EGS or pH1-3/4 ntl-EGS produced the full no tail phenotype at long-pec stage in proportion as 24 or 35%, respectively. As is expected that the full-length ntl mRNA of embryos at 50% epiboly stage decreased relative to control when injected the embryos with 3/4 EGS or m3/4 EGS RNA. Interestingly, ntl RNA transcripts, including the cleaved by EGS and the untouched, increased. Taken together, these results indicate that EGS strategy can work in zebrafish in vivo and becomes a potential tool for degradation of targeted mRNAs.

摘要

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本文引用的文献

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Nucleic Acids Res. 2005 Mar 8;33(5):1487-502. doi: 10.1093/nar/gki290. Print 2005.
2
Noise amidst the silence: off-target effects of siRNAs?寂静中的噪音:小干扰RNA的脱靶效应?
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3
Inhibition of the expression of the human RNase P protein subunits Rpp21, Rpp25, Rpp29 by external guide sequences (EGSs) and siRNA.
外部引导序列技术:新型抗菌疗法的发展之路。
Ann N Y Acad Sci. 2015 Sep;1354(1):98-110. doi: 10.1111/nyas.12755. Epub 2015 Apr 9.
4
Inactivation of expression of two genes in Saccharomyces cerevisiae with the external guide sequence methodology.利用外显子引导序列方法使酿酒酵母中两个基因的表达失活。
RNA. 2011 Mar;17(3):544-9. doi: 10.1261/rna.2538711. Epub 2011 Jan 13.
5
Molecular analysis and heavy metal detoxification of ABCC1/MRP1 in zebrafish.ABCC1/MRP1 的分子分析与重金属解毒在斑马鱼中的研究。
Mol Biol Rep. 2011 Mar;38(3):1703-11. doi: 10.1007/s11033-010-0283-z. Epub 2010 Sep 15.
通过外部引导序列(EGS)和小干扰RNA(siRNA)抑制人核糖核酸酶P蛋白亚基Rpp21、Rpp25、Rpp29的表达。
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An RNA external guide sequence ribozyme targeting human interleukin-4 receptor alpha mRNA.一种靶向人白细胞介素-4受体α mRNA的RNA外部引导序列核酶。
Int Immunopharmacol. 2004 Aug;4(8):1015-27. doi: 10.1016/j.intimp.2004.03.012.
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Many commonly used siRNAs risk off-target activity.许多常用的小干扰RNA存在脱靶活性风险。
Biochem Biophys Res Commun. 2004 Jun 18;319(1):256-63. doi: 10.1016/j.bbrc.2004.04.175.
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