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ClusterDraw网络服务器：一种识别和可视化转录因子结合基序簇的工具。

ClusterDraw web server: a tool to identify and visualize clusters of binding motifs for transcription factors.

作者信息

Papatsenko Dmitri

机构信息

Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.

出版信息

Bioinformatics. 2007 Apr 15;23(8):1032-4. doi: 10.1093/bioinformatics/btm047. Epub 2007 Feb 18.

DOI:10.1093/bioinformatics/btm047
PMID:17308342
Abstract

ClusterDraw is a program aimed to identification of binding sites and binding-site clusters. Major difference of the ClusterDraw from existing tools is its ability to scan a wide range of parameter values and weigh statistical significance of all possible clusters, smaller than a selected size. The program produces graphs along with decorated FASTA files. ClusterDraw web server is available at the following URL: http://flydev.berkeley.edu/cgi-bin/cld/submit.cgi

摘要

ClusterDraw是一个旨在识别结合位点和结合位点簇的程序。ClusterDraw与现有工具的主要区别在于它能够扫描广泛的参数值，并权衡所有可能的、小于选定大小的簇的统计显著性。该程序会生成图表以及带有注释的FASTA文件。可通过以下网址访问ClusterDraw网络服务器：http://flydev.berkeley.edu/cgi-bin/cld/submit.cgi

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