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环带马陆(Orchesella cincta (L.))中金属硫蛋白的等位基因多样性:环境污染导致的自然选择痕迹

Allelic diversity of metallothionein in Orchesella cincta (L.): traces of natural selection by environmental pollution.

作者信息

Timmermans M J T N, Ellers J, Van Straalen N M

机构信息

Department of Animal Ecology, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.

出版信息

Heredity (Edinb). 2007 May;98(5):311-9. doi: 10.1038/sj.hdy.6800942. Epub 2007 Feb 21.

Abstract

The advances made in statistical methods to detect selection from DNA sequence variation has resulted in an enormous increase in the number of studies reporting positive selection. However, a disadvantage of such statistical tests is that often no insight into the actual source of selection is obtained. Finer understanding of evolution can be obtained when those statistical tests are combined with field observations on allele frequencies. We assessed whether the metallothionein (mt) gene of Orchesella cincta (Collembola), which codes for a metal-binding protein, is subject to selection, by investigating alleles and allele frequencies among European metal-stressed and reference populations. Eight highly divergent alleles were resolved in Northwest Europe. At the nucleotide level, a total of 51 polymorphic sites (five of them implying amino-acid changes) were observed. Although statistical tests applied to the sequences alone showed no indication of selection, a G-test rejected the null hypothesis that alleles are homogeneously distributed over metal-stressed and reference populations. Analysis of molecular variance assigned a small, but significant amount of the total variance to differences between metal-stressed and non-stressed populations. In addition, it was shown that metal-stressed populations tend to be more genetically diversified at this locus than non-stressed ones. These results suggest that the mt gene and its surrounding DNA region are affected by environmental metal contamination. This study illustrates that, in addition to statistical tests, field observations on allele frequencies are needed to gain understanding of selection and adaptive evolution.

摘要

用于从DNA序列变异中检测选择的统计方法取得的进展,导致报告正选择的研究数量大幅增加。然而,此类统计检验的一个缺点是,通常无法深入了解选择的实际来源。当这些统计检验与等位基因频率的实地观察相结合时,能够更深入地理解进化。我们通过调查欧洲金属污染地区和对照种群中的等位基因及等位基因频率,评估了编码金属结合蛋白的弹尾目昆虫奥氏棘跳虫(Orchesella cincta)的金属硫蛋白(mt)基因是否受到选择。在欧洲西北部解析出了八个高度分化的等位基因。在核苷酸水平上,共观察到51个多态性位点(其中五个意味着氨基酸变化)。尽管仅对序列进行的统计检验未显示选择迹象,但一项G检验拒绝了等位基因在金属污染地区和对照种群中均匀分布的零假设。分子方差分析将总方差的一小部分但显著部分归因于金属污染地区和未受污染种群之间的差异。此外,研究表明,在这个基因座上,金属污染地区的种群往往比未受污染的种群具有更多的遗传多样性。这些结果表明,mt基因及其周围的DNA区域受到环境金属污染的影响。这项研究表明,除了统计检验外,还需要对等位基因频率进行实地观察,以了解选择和适应性进化。

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