Taniguchi Yuichi, Karagiannis Peter, Nishiyama Masayoshi, Ishii Yoshiharu, Yanagida Toshio
Laboratories for Nanobiology, Graduate School of Frontier Biosciences, Osaka University, 1-3, Yamadaoka, Suita, Osaka 565-0871, Japan.
Biosystems. 2007 Apr;88(3):283-92. doi: 10.1016/j.biosystems.2006.08.016. Epub 2006 Nov 10.
Biological molecular machines use thermal activation energy to carry out various functions. The process of thermal activation has the stochastic nature of output events that can be described according to the laws of thermodynamics. Recently developed single molecule detection techniques have allowed each distinct enzymatic event of single biological machines to be characterized providing clues to the underlying thermodynamics. In this study, the thermodynamic properties in the stepping movement of a biological molecular motor have been examined. A single molecule detection technique was used to measure the stepping movements at various loads and temperatures and a range of thermodynamic parameters associated with the production of each forward and backward step including free energy, enthalpy, entropy and characteristic distance were obtained. The results show that an asymmetry in entropy is a primary factor that controls the direction in which the motor will step. The investigation on single molecule thermodynamics has the potential to reveal dynamic properties underlying the mechanisms of how biological molecular machines work.
生物分子机器利用热激活能来执行各种功能。热激活过程具有输出事件的随机性,这可以根据热力学定律来描述。最近开发的单分子检测技术能够对单个生物机器的每个独特酶促事件进行表征,为潜在的热力学提供线索。在本研究中,对生物分子马达步进运动中的热力学性质进行了研究。使用单分子检测技术测量了在各种负载和温度下的步进运动,并获得了与每个向前和向后步的产生相关的一系列热力学参数,包括自由能、焓、熵和特征距离。结果表明,熵的不对称是控制马达步进方向的主要因素。对单分子热力学的研究有可能揭示生物分子机器工作机制背后的动态特性。