Department of Biosciences, Rice University, Houston, Texas, USA.
Department of Biosciences, Rice University, Houston, Texas, USA; Department of Chemistry, Rice University, Houston, Texas, USA.
J Biol Chem. 2021 Jan-Jun;296:100749. doi: 10.1016/j.jbc.2021.100749. Epub 2021 May 4.
Proteins are the molecular machines of living systems. Their dynamics are an intrinsic part of their evolutionary selection in carrying out their biological functions. Although the dynamics are more difficult to observe than a static, average structure, we are beginning to observe these dynamics and form sound mechanistic connections between structure, dynamics, and function. This progress is highlighted in case studies from myoglobin and adenylate kinase to the ribosome and molecular motors where these molecules are being probed with a multitude of techniques across many timescales. New approaches to time-resolved crystallography are allowing simple "movies" to be taken of proteins in action, and new methods of mapping the variations in cryo-electron microscopy are emerging to reveal a more complete description of life's machines. The results of these new methods are aided in their dissemination by continual improvements in curation and distribution by the Protein Data Bank and their partners around the world.
蛋白质是生命系统的分子机器。它们的动力学是其在执行生物功能时进行进化选择的固有部分。虽然动力学比静态平均结构更难观察,但我们开始观察这些动力学,并在结构、动力学和功能之间形成合理的机械联系。这方面的进展在我的肌红蛋白和腺苷酸激酶的案例研究中得到了强调,研究对象扩展到核糖体和分子马达,这些分子正在利用多种技术在多个时间尺度上进行探测。新的时间分辨晶体学方法允许对处于活动状态的蛋白质进行简单的“电影”拍摄,而新的低温电子显微镜映射变化的方法也在不断涌现,以揭示更完整的生命机器描述。这些新方法的结果通过蛋白质数据库及其在世界各地的合作伙伴不断改进的策展和分发得到了促进。