Fingert John H, Honkanen Robert A, Shankar Suma P, Affatigato Louisa M, Ehlinger Mary A, Moore Michael D, Jampol Lee M, Sheffield Val C, Stone Edwin M, Alward Wallace L M
Department of Ophthalmology and Visual Sciences, Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242, USA.
Am J Ophthalmol. 2007 May;143(5):795-800. doi: 10.1016/j.ajo.2007.01.042. Epub 2007 Mar 19.
To identify the chromosomal location of the gene involved in the pathogenesis of cavitary optic disk anomalies in a large pedigree with autosomal dominant inheritance of disease.
Linkage analysis of a pedigree affected with cavitary optic disk anomalies.
Optic disk photographs were examined for the presence of cavitary optic disk anomalies. Sixteen affected family members and one obligate carrier were identified and studied with linkage analysis using both microarrays of single nucleotide polymorphisms (SNPs) and short tandem repeat polymorphism (STRP) markers.
Multipoint linkage analysis of SNP genotypes yielded a maximum nonparametric logarithm of the odds (LOD) score of 21.7 with markers located on chromosome 12q. Linkage was confirmed with 16 STRP markers in the 12q region. A maximum two-point LOD score of 4.06 (theta = 0) was obtained with marker D12S1700. The disease interval defined by observed recombinants is 9.1 cM, which corresponds to 13.5 Mbp. Three candidate genes (GDF-11, NEUROD4, and WIF1) in the chromosome 12q locus were evaluated as possible disease-causing genes. No mutations were detected in the coding sequence of these genes.
The discovery of the chromosomal location of a gene responsible for cavitary optic disk anomalies is a key step in identifying the genetic basis of this condition and ultimately may provide important insight into the pathogenesis of more common optic nerve diseases such as normal-tension glaucoma and primary open-angle glaucoma (POAG).
在一个疾病呈常染色体显性遗传的大家系中,确定与空洞性视盘异常发病机制相关基因的染色体定位。
对一个患空洞性视盘异常的家系进行连锁分析。
检查视盘照片以确定是否存在空洞性视盘异常。识别出16名患病家庭成员和1名肯定携带者,并使用单核苷酸多态性(SNP)微阵列和短串联重复多态性(STRP)标记通过连锁分析进行研究。
对SNP基因型进行多点连锁分析,位于12号染色体q臂上的标记产生的最大非参数优势对数(LOD)评分为21.7。在12q区域用16个STRP标记证实了连锁关系。标记D12S1700获得的最大两点LOD评分为4.06(θ = 0)。由观察到的重组体确定的疾病区间为9.1厘摩,相当于13.5兆碱基对。对12号染色体q臂位点的三个候选基因(GDF - 11、NEUROD4和WIF1)作为可能的致病基因进行了评估。在这些基因的编码序列中未检测到突变。
发现导致空洞性视盘异常的基因的染色体定位是确定这种疾病遗传基础的关键一步,最终可能为更常见的视神经疾病如正常眼压性青光眼和原发性开角型青光眼(POAG)的发病机制提供重要见解。