Tiago Teresa, Martel Paulo, Gutiérrez-Merino Carlos, Aureliano Manuel
Departamento de Química e Bioquímica, FCT, Universidade do Algarve, Faro, Portugal.
Biochim Biophys Acta. 2007 Apr;1774(4):474-80. doi: 10.1016/j.bbapap.2007.02.004. Epub 2007 Feb 20.
Decavanadate, a vanadate oligomer, is known to interact with myosin and to inhibit the ATPase activity, but the putative binding sites and the mechanism of inhibition are still to be clarified. We have previously proposed that the decavanadate (V(10)O(28)(6-)) inhibition of the actin-stimulated myosin ATPase activity is non-competitive towards both actin and ATP. A likely explanation for these results is that V(10) binds to the so-called back-door at the end of the Pi-tube opposite to the nucleotide-binding site. In order to further investigate this possibility, we have carried out molecular docking simulations of the V(10) oligomer on three different structures of the myosin motor domain of Dictyostelium discoideum, representing distinct states of the ATPase cycle. The results indicate a clear preference of V(10) to bind at the back-door, but only on the "open" structures where there is access to the phosphate binding-loop. It is suggested that V(10) acts as a "back-door stop" blocking the closure of the 50-kDa cleft necessary to carry out ATP-gamma-phosphate hydrolysis. This provides a simple explanation to the non-competitive behavior of V(10) and spurs the use of the oligomer as a tool to elucidate myosin back-door conformational changes in the process of muscle contraction.
十钒酸盐是一种钒酸盐低聚物,已知它能与肌球蛋白相互作用并抑制ATP酶活性,但其假定的结合位点和抑制机制仍有待阐明。我们之前提出,十钒酸盐(V(10)O(28)(6-))对肌动蛋白刺激的肌球蛋白ATP酶活性的抑制作用对肌动蛋白和ATP均为非竞争性的。对这些结果的一个可能解释是,V(10)与位于与核苷酸结合位点相对的Pi管末端的所谓“后门”结合。为了进一步研究这种可能性,我们对盘基网柄菌肌球蛋白运动结构域的三种不同结构进行了V(10)低聚物的分子对接模拟,这些结构代表了ATP酶循环的不同状态。结果表明,V(10)明显倾向于结合在“后门”,但仅在能够接触到磷酸盐结合环的“开放”结构上。有人提出,V(10)充当“后门制动器”,阻止进行ATP-γ-磷酸水解所需的50 kDa裂隙的关闭。这为V(10)的非竞争性行为提供了一个简单的解释,并促使人们将这种低聚物用作阐明肌肉收缩过程中肌球蛋白后门构象变化的工具。