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剥脱沉积物的蛋白质组学分析

Proteomic analysis of exfoliation deposits.

作者信息

Ovodenko Boris, Rostagno Agueda, Neubert Thomas A, Shetty Vivekananda, Thomas Stefani, Yang Austin, Liebmann Jeffrey, Ghiso Jorge, Ritch Robert

机构信息

Department of Ophthalmology, New York Eye and Ear Infirmary, New York, NY, USA.

出版信息

Invest Ophthalmol Vis Sci. 2007 Apr;48(4):1447-57. doi: 10.1167/iovs.06-0411.

Abstract

PURPOSE

To increase knowledge of the biochemical composition of lenticular exfoliation material (XFM) by using proteomic approaches.

METHODS

Anterior lens capsules from patients with and without exfoliation syndrome (XFS) were homogenized in formic acid and subjected to cyanogen bromide (CNBr) cleavage, and the pattern of chemically generated fragments was compared by SDS-PAGE after silver staining. Unique XFS bands not present in control cases were excised, digested with TPCK-trypsin, and the resultant peptides sequenced with quadrupole time-of-flight mass spectrometry (MS). In parallel experiments, CNBr-fragmented XFM was separately digested in solution with trypsin and elastase, and the resultant peptide mixture was analyzed by liquid chromatography coupled to tandem MS followed by identification through homology searches at nonredundant protein databases. Immunolocalization of the MS-identified components were performed in XFS versus control samples by using conventional immunohistochemical methods and light microscopy.

RESULTS

In addition to fibrillin-1, fibronectin, vitronectin, laminin, and amyloid P-component, which are well-known extracellular matrix and basement membrane components of XFM, the proteomic approaches identified the multifunctional protein clusterin and tissue inhibitor of metalloprotease (TIMP)-3 as well as novel molecules, among them fibulin-2, desmocollin-2, the glycosaminoglycans syndecan-3, and versican, membrane metalloproteases of the ADAM family (a disintegrin and metalloprotease), and the initiation component of the classic complement activation pathway C1q. In all cases, classic immunohistochemistry confirmed their location in XFM.

CONCLUSIONS

A novel solubilization strategy combined with sensitive proteomic analysis emphasizes the complexity of the XFS deposits and opens new avenues to study the molecular mechanisms involved in the pathogenesis and progression of XFS.

摘要

目的

通过蛋白质组学方法增加对晶状体囊膜剥脱物质(XFM)生化组成的了解。

方法

将有和没有剥脱综合征(XFS)患者的晶状体前囊膜在甲酸中匀浆,进行溴化氰(CNBr)裂解,银染后通过SDS-PAGE比较化学产生的片段模式。切除对照病例中不存在的独特XFS条带,用TPCK-胰蛋白酶消化,并用四极杆飞行时间质谱(MS)对所得肽段进行测序。在平行实验中,将经CNBr裂解的XFM分别用胰蛋白酶和弹性蛋白酶在溶液中消化,所得肽混合物通过液相色谱-串联质谱分析,随后通过在非冗余蛋白质数据库中进行同源性搜索进行鉴定。通过使用传统免疫组织化学方法和光学显微镜,在XFS与对照样品中对MS鉴定的成分进行免疫定位。

结果

除了原纤维蛋白-1、纤连蛋白、玻连蛋白、层粘连蛋白和淀粉样P成分,这些都是XFM中众所周知的细胞外基质和基底膜成分外,蛋白质组学方法还鉴定出多功能蛋白簇集素和金属蛋白酶组织抑制剂(TIMP)-3以及新分子,其中包括纤维胶凝蛋白-2、桥粒芯胶蛋白-2、糖胺聚糖多配体蛋白聚糖-3和多功能蛋白聚糖、ADAM家族(一种解整合素和金属蛋白酶)的膜金属蛋白酶以及经典补体激活途径C1q的起始成分。在所有情况下,经典免疫组织化学证实了它们在XFM中的定位。

结论

一种新的溶解策略与灵敏的蛋白质组学分析相结合,强调了XFS沉积物的复杂性,并为研究XFS发病机制和进展中涉及的分子机制开辟了新途径。

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