Pang Chi Nam Ignatius, Hayen Andrew, Wilkins Marc Ronald
Systems Biology Group, School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, Australia.
J Proteome Res. 2007 May;6(5):1833-45. doi: 10.1021/pr060674u. Epub 2007 Apr 12.
Protein post-translational modifications are crucial to the function of many proteins. In this study, we have investigated the structural environment of 8378 incidences of 44 types of post-translational modifications with 19 different approaches. We show that modified amino acids likely to be involved in protein-protein interactions, such as ester-linked phosphorylation, methylarginine, acetyllysine, sulfotyrosine, hydroxyproline, and hydroxylysine, are clearly surface associated. Other modifications, including O-GlcNAc, phosphohistidine, 4-aspartylphosphate, methyllysine, and ADP-ribosylarginine, are either not surface associated or are in a protein's core. Artifactual modifications were found to be randomly distributed throughout the protein. We discuss how the surface accessibility of post-translational modifications can be important for protein-protein interactivity.
蛋白质翻译后修饰对于许多蛋白质的功能至关重要。在本研究中,我们采用19种不同方法研究了44种翻译后修饰的8378个实例的结构环境。我们发现,可能参与蛋白质-蛋白质相互作用的修饰氨基酸,如酯联磷酸化、甲基精氨酸、乙酰赖氨酸、磺基酪氨酸、羟脯氨酸和羟赖氨酸,明显与表面相关。其他修饰,包括O-连接的N-乙酰葡糖胺、磷酸组氨酸、4-天冬氨酰磷酸、甲基赖氨酸和ADP-核糖基精氨酸,要么不与表面相关,要么位于蛋白质的核心部位。发现人为修饰在整个蛋白质中随机分布。我们讨论了翻译后修饰的表面可及性如何对蛋白质-蛋白质相互作用很重要。