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酶促纤维素水解的本征动力学建模。

Modeling intrinsic kinetics of enzymatic cellulose hydrolysis.

作者信息

Peri Suma, Karra Srinivas, Lee Y Y, Karim M Nazmul

机构信息

Department of Chemical Engineering, Texas Tech University, Lubbock, Texas, USA.

出版信息

Biotechnol Prog. 2007 May-Jun;23(3):626-37. doi: 10.1021/bp060322s. Epub 2007 Apr 28.

Abstract

A multistep approach was taken to investigate the intrinsic kinetics of the cellulase enzyme complex as observed with hydrolysis of noncrystalline cellulose (NCC). In the first stage, published initial rate mechanistic models were built and critically evaluated for their performance in predicting time-course kinetics, using the data obtained from enzymatic hydrolysis experiments performed on two substrates: NCC and alpha-cellulose. In the second stage, assessment of the effect of reaction intermediates and products on intrinsic kinetics of enzymatic hydrolysis was performed using NCC hydrolysis experiments, isolating external factors such as mass transfer effects, physical properties of substrate, etc. In the final stage, a comprehensive intrinsic kinetics mechanism was proposed. From batch experiments using NCC, the time-course data on cellulose, cello-oligosaccharides (COS), cellobiose, and glucose were taken and used to estimate the parameters in the kinetic model. The model predictions of NCC, COS, cellobiose, and glucose profiles show a good agreement with experimental data generated from hydrolysis of different initial compositions of substrate (NCC supplemented with COS, cellobiose, and glucose). Finally, sensitivity analysis was performed on each model parameter; this analysis provides some insights into the yield of glucose in the enzymatic hydrolysis. The proposed intrinsic kinetic model parametrized for dilute cellulose systems forms a basis for modeling the complex enzymatic kinetics of cellulose hydrolysis in the presence of limiting factors offered by substrate and enzyme characteristics.

摘要

采用多步骤方法来研究纤维素酶复合物的本征动力学,该动力学可通过非晶态纤维素(NCC)的水解观察到。在第一阶段,构建已发表的初始速率机理模型,并使用从对两种底物(NCC和α-纤维素)进行的酶水解实验中获得的数据,对其预测时间进程动力学的性能进行严格评估。在第二阶段,通过NCC水解实验评估反应中间体和产物对酶水解本征动力学的影响,分离诸如传质效应、底物物理性质等外部因素。在最后阶段,提出了一个全面的本征动力学机理。通过使用NCC的间歇实验,获取了关于纤维素、纤维寡糖(COS)、纤维二糖和葡萄糖的时间进程数据,并用于估计动力学模型中的参数。NCC、COS、纤维二糖和葡萄糖曲线的模型预测与由不同初始组成底物(补充了COS、纤维二糖和葡萄糖的NCC)水解产生的实验数据显示出良好的一致性。最后,对每个模型参数进行了敏感性分析;该分析为酶水解中葡萄糖的产率提供了一些见解。为稀纤维素系统参数化的所提出的本征动力学模型,为在存在由底物和酶特性提供的限制因素的情况下,对纤维素水解的复杂酶动力学进行建模奠定了基础。

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