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KSY1,一种具有类似T7转录的乳球菌噬菌体。

KSY1, a lactococcal phage with a T7-like transcription.

作者信息

Chopin Alain, Deveau Hélène, Ehrlich S Dusko, Moineau Sylvain, Chopin Marie-Christine

机构信息

Laboratoire de Génétique Microbienne, INRA, 78352 Jouy-en-Josas, France.

出版信息

Virology. 2007 Aug 15;365(1):1-9. doi: 10.1016/j.virol.2007.03.044. Epub 2007 Apr 30.

Abstract

The virulent lactococcal phage KSY1 possesses a large elongated capsid (223 nm long, 45 nm wide) and a short tail (32 nm). This phage of the Podoviridae group (C3 morphotype) has a linear 79,232-bp double-stranded DNA genome, which encodes 131 putative proteins and 3 tRNAs. This is the first description of the genome of a phage of this morphotype. KSY1 possesses a T7-like transcription system, including an RNA polymerase and a series of specific promoters, showing sequence homology to other known T7-like RNA polymerase promoters. Late stages of KSY1 multiplication are resistant to rifampicin. Otherwise, KSY1 shares limited similarity with other Podoviridae phages. Fourteen KSY1 structural proteins were identified by SDS-PAGE analysis. Among these proteins, those forming the distal tail structure and likely involved in host recognition are encoded by a 5-kb genomic region of KSY1. This region consists of a mosaic of DNA segments highly homologous to DNA of other lactococcal phages, suggesting an horizontal gene transfer.

摘要

烈性乳球菌噬菌体KSY1具有一个大型细长衣壳(长223纳米,宽45纳米)和一条短尾(32纳米)。这种属于短尾噬菌体科(C3形态型)的噬菌体具有一个线性的79,232碱基对双链DNA基因组,该基因组编码131个推定蛋白和3个tRNA。这是对这种形态型噬菌体基因组的首次描述。KSY1拥有一个T7样转录系统,包括一种RNA聚合酶和一系列特定启动子,与其他已知的T7样RNA聚合酶启动子具有序列同源性。KSY1增殖的后期阶段对利福平具有抗性。除此之外,KSY1与其他短尾噬菌体科噬菌体的相似性有限。通过SDS-PAGE分析鉴定出了14种KSY1结构蛋白。在这些蛋白中,那些形成远端尾部结构并可能参与宿主识别的蛋白由KSY1的一个5千碱基基因组区域编码。该区域由与其他乳球菌噬菌体DNA高度同源的DNA片段镶嵌组成,表明存在水平基因转移。

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