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下班时间:模拟噬菌体诱导的大肠杆菌裂解过程。

Clocking out: modeling phage-induced lysis of Escherichia coli.

作者信息

Ryan Gillian L, Rutenberg Andrew D

机构信息

Department of Physics and Atmospheric Science, Dalhousie University, Halifax, Nova Scotia, Canada.

出版信息

J Bacteriol. 2007 Jul;189(13):4749-55. doi: 10.1128/JB.00392-07. Epub 2007 Apr 27.

Abstract

Phage lambda lyses the host Escherichia coli at a precisely scheduled time after induction. Lysis timing is determined by the action of phage holins, which are small proteins that induce hole formation in the bacterium's cytoplasmic membrane. We present a two-stage nucleation model of lysis timing, with the nucleation of condensed holin rafts on the inner membrane followed by the nucleation of a hole within those rafts. The nucleation of holin rafts accounts for most of the delay of lysis after induction. Our simulations of this model recover the accurate lysis timing seen experimentally and show that the timing accuracy is optimal. An enhanced holin-holin interaction is needed in our model to recover experimental lysis delays after the application of membrane poison, and such early triggering of lysis is possible only after the inner membrane is supersaturated with holin. Antiholin reduces the delay between membrane depolarization and lysis and leads to an earlier time after which triggered lysis is possible.

摘要

λ噬菌体在诱导后的精确预定时间裂解宿主大肠杆菌。裂解时间由噬菌体孔蛋白的作用决定,孔蛋白是一种小蛋白,可诱导细菌细胞质膜形成孔洞。我们提出了一个裂解时间的两阶段成核模型,即在内膜上凝聚的孔蛋白筏的成核,随后在这些筏内形成孔洞的成核。孔蛋白筏的成核占诱导后裂解延迟的大部分。我们对该模型的模拟恢复了实验中观察到的准确裂解时间,并表明时间准确性是最佳的。在我们的模型中,需要增强孔蛋白-孔蛋白相互作用以恢复施加膜毒物后的实验裂解延迟,并且只有在内膜被孔蛋白过饱和后才可能发生这种早期裂解触发。抗孔蛋白减少了膜去极化和裂解之间的延迟,并导致更早的时间,之后可能触发裂解。

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