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一种从巴西橡胶树(三叶橡胶树)胶乳中分离高质量RNA的简便高效方法。

A convenient and efficient protocol for isolating high-quality RNA from latex of Hevea brasiliensis (para rubber tree).

作者信息

Tang Chaorong, Qi Jiyan, Li Heping, Zhang Cunliang, Wang Yuekun

机构信息

Key Lab of Ministry of Agriculture for Tropical Crops Physiology, Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou, Hainan 571737, China.

出版信息

J Biochem Biophys Methods. 2007 Aug 1;70(5):749-54. doi: 10.1016/j.jbbm.2007.04.002. Epub 2007 Apr 13.

Abstract

Isolating high-quality RNA from latex of H. brasiliensis is a prerequisite to elucidating the molecular mechanisms of rubber biosynthesis and its regulation. Here, an improved protocol was developed for latex collection, transportation, storage, and RNA isolation. Compared with existing ones, our protocol eliminated liquid nitrogen for latex collection and subsequent low-temperature (-70 degrees C) condition for latex storage, making it more convenient and feasible when latex was collected in remote sampling sites, and latex storage and RNA isolation were conducted in poorly-equipped laboratories. Different methods (UV absorbance scans, denaturing gel electrophoresis, autoradiograph monitoring of cDNA synthesis) were used to confirm the high quality of the RNA prepared with this protocol, whose usefulness was further verified by several practical applications, including construction of one high-quality cDNA library, cloning of the full-length cDNAs of 3 novel Hevea sucrose transporter genes, and semi-quantitative RT-PCR analysis of two rubber-biosynthesis essential genes and one sucrose transporter gene.

摘要

从巴西橡胶树胶乳中分离高质量RNA是阐明橡胶生物合成及其调控分子机制的前提条件。在此,我们开发了一种改进的方案,用于胶乳的采集、运输、储存和RNA分离。与现有方案相比,我们的方案省去了用于胶乳采集的液氮以及随后胶乳储存所需的低温(-70摄氏度)条件,使得在偏远采样点采集胶乳以及在设备简陋的实验室进行胶乳储存和RNA分离时更加方便可行。我们使用了不同方法(紫外吸收扫描、变性凝胶电泳、cDNA合成的放射自显影监测)来确认用该方案制备的RNA的高质量,通过几个实际应用进一步验证了其有效性,包括构建一个高质量cDNA文库、克隆3个新的橡胶树蔗糖转运蛋白基因的全长cDNA,以及对两个橡胶生物合成必需基因和一个蔗糖转运蛋白基因进行半定量RT-PCR分析。

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