• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

HslV蛋白酶中原聚体界面的特征;20S蛋白酶体的细菌同源物。

Characterization of protomer interfaces in HslV protease; the bacterial homologue of 20S proteasome.

作者信息

Azim M Kamran, Noor Sajid

机构信息

H.E.J. Research Institute of Chemistry, International Center for Chemical Sciences, University of Karachi, Karachi, Pakistan.

出版信息

Protein J. 2007 Jun;26(4):213-9. doi: 10.1007/s10930-006-9048-x.

DOI:10.1007/s10930-006-9048-x
PMID:17522969
Abstract

HslVU, a two-component proteasome-related prokaryotic system is composed of HslV protease and HslU ATPase. HslV protomers assemble in a dodecamer of two-stacked hexameric rings that form a complex with HslU hexamers. The intra- and inter-ring protomer interfaces in the HslV dodecamer underpin the integrity and functionality of HslVU. Structural characterization of HslV from different bacteria illustrated considerable differences in interacting residues, accessible surface and gap volumes at the intra-ring interface that is primarily stabilized by polar interactions. Amino acid residues Lys28, Arg83 and Asp111 have envisaged as hot spots at this HslU-interacting interface. The inter-ring interfaces that are made up of side chain packing of hydrophobic residues are structurally conserved. Hyperthermostable bacterium T. maritima HslV has extensively networked polar/nonpolar interactions and highly packed environment at all interfaces. Present data demonstrates that HslV protomer interfaces perform distinct functions; whereas intra-ring interface participates in HslV:HslU interaction resulting in allosteric activation of HslV protease by HslU, the inter-ring interfaces uphold the oligomeric form of HslV.

摘要

HslVU是一种与蛋白酶体相关的双组分原核系统,由HslV蛋白酶和HslU ATP酶组成。HslV原体组装成由两个堆叠的六聚体环组成的十二聚体,该十二聚体与HslU六聚体形成复合物。HslV十二聚体中的环内和环间原体界面支撑着HslVU的完整性和功能性。来自不同细菌的HslV的结构表征表明,环内界面处相互作用的残基、可及表面和间隙体积存在显著差异,该界面主要由极性相互作用稳定。氨基酸残基Lys28、Arg83和Asp111被认为是该HslU相互作用界面的热点。由疏水残基的侧链堆积组成的环间界面在结构上是保守的。超嗜热细菌海栖热袍菌HslV在所有界面都有广泛的极性/非极性相互作用网络和高度密集的环境。目前的数据表明,HslV原体界面执行不同的功能;环内界面参与HslV:HslU相互作用,导致HslU对HslV蛋白酶的变构激活,而环间界面维持HslV的寡聚形式。

相似文献

1
Characterization of protomer interfaces in HslV protease; the bacterial homologue of 20S proteasome.HslV蛋白酶中原聚体界面的特征;20S蛋白酶体的细菌同源物。
Protein J. 2007 Jun;26(4):213-9. doi: 10.1007/s10930-006-9048-x.
2
The ATP-dependent HslVU protease from Escherichia coli is a four-ring structure resembling the proteasome.来自大肠杆菌的ATP依赖型HslVU蛋白酶是一种类似于蛋白酶体的四环结构。
Nat Struct Biol. 1997 Feb;4(2):133-9. doi: 10.1038/nsb0297-133.
3
Role of the GYVG pore motif of HslU ATPase in protein unfolding and translocation for degradation by HslV peptidase.HslU ATP酶的GYVG孔基序在蛋白质解折叠及转运以供HslV肽酶降解过程中的作用
J Biol Chem. 2005 Jun 17;280(24):22892-8. doi: 10.1074/jbc.M500035200. Epub 2005 Apr 22.
4
Isolation and characterization of the prokaryotic proteasome homolog HslVU (ClpQY) from Thermotoga maritima and the crystal structure of HslV.嗜热栖热菌原核蛋白酶体同源物HslVU(ClpQY)的分离与特性鉴定以及HslV的晶体结构
Biophys Chem. 2003;100(1-3):437-52. doi: 10.1016/s0301-4622(02)00297-1.
5
Structure and reactivity of an asymmetric complex between HslV and I-domain deleted HslU, a prokaryotic homolog of the eukaryotic proteasome.HslV与I结构域缺失的HslU(真核蛋白酶体的原核同源物)之间不对称复合物的结构与反应活性
J Mol Biol. 2003 Jul 4;330(2):185-95. doi: 10.1016/s0022-2836(03)00580-1.
6
Structural alteration in the pore motif of the bacterial 20S proteasome homolog HslV leads to uncontrolled protein degradation.细菌 20S 蛋白酶体同源物 HslV 孔道基序的结构改变导致蛋白失控降解。
J Mol Biol. 2013 Aug 23;425(16):2940-54. doi: 10.1016/j.jmb.2013.05.011. Epub 2013 May 21.
7
Proteasome-related HslU and HslV genes typical of eubacteria are widespread in eukaryotes.典型的真细菌蛋白酶体相关HslU和HslV基因在真核生物中广泛存在。
J Mol Evol. 2006 Oct;63(4):504-12. doi: 10.1007/s00239-005-0282-1. Epub 2006 Oct 4.
8
Binding of MG132 or deletion of the Thr active sites in HslV subunits increases the affinity of HslV protease for HslU ATPase and makes this interaction nucleotide-independent.MG132的结合或HslV亚基中苏氨酸活性位点的缺失会增加HslV蛋白酶对HslU ATP酶的亲和力,并使这种相互作用不依赖核苷酸。
J Biol Chem. 2008 Nov 28;283(48):33258-66. doi: 10.1074/jbc.M805411200. Epub 2008 Oct 6.
9
The C-terminal tails of HslU ATPase act as a molecular switch for activation of HslV peptidase.HslU ATP酶的C末端尾巴作为激活HslV肽酶的分子开关。
J Biol Chem. 2002 Jul 19;277(29):25976-82. doi: 10.1074/jbc.M202793200. Epub 2002 May 14.
10
HslV-HslU: A novel ATP-dependent protease complex in Escherichia coli related to the eukaryotic proteasome.HslV-HslU:大肠杆菌中一种与真核生物蛋白酶体相关的新型ATP依赖性蛋白酶复合物。
Proc Natl Acad Sci U S A. 1996 Jun 11;93(12):5808-13. doi: 10.1073/pnas.93.12.5808.

本文引用的文献

1
Characterization of the HslU chaperone affinity for HslV protease.HslU伴侣蛋白对HslV蛋白酶的亲和力特性
Protein Sci. 2005 May;14(5):1357-62. doi: 10.1110/ps.04970405. Epub 2005 Mar 31.
2
Molecular machines for protein degradation.用于蛋白质降解的分子机器。
Chembiochem. 2005 Feb;6(2):222-56. doi: 10.1002/cbic.200400313.
3
Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues.蛋白质-蛋白质相互作用中的热点区域:结构保守热点残基的组织与贡献
J Mol Biol. 2005 Feb 4;345(5):1281-94. doi: 10.1016/j.jmb.2004.10.077. Epub 2004 Dec 2.
4
The modular architecture of protein-protein binding interfaces.蛋白质-蛋白质结合界面的模块化结构。
Proc Natl Acad Sci U S A. 2005 Jan 4;102(1):57-62. doi: 10.1073/pnas.0407280102. Epub 2004 Dec 23.
5
Protein-protein interactions: hot spots and structurally conserved residues often locate in complemented pockets that pre-organized in the unbound states: implications for docking.蛋白质-蛋白质相互作用:热点和结构保守残基通常位于未结合状态下预先形成的互补口袋中:对接的意义。
J Mol Biol. 2004 Nov 26;344(3):781-95. doi: 10.1016/j.jmb.2004.09.051.
6
A dissection of specific and non-specific protein-protein interfaces.特异性与非特异性蛋白质-蛋白质相互作用界面的剖析
J Mol Biol. 2004 Feb 27;336(4):943-55. doi: 10.1016/j.jmb.2003.12.073.
7
Computational alanine scanning of protein-protein interfaces.蛋白质-蛋白质界面的计算丙氨酸扫描
Sci STKE. 2004 Feb 3;2004(219):pl2. doi: 10.1126/stke.2192004pl2.
8
Molecular shredders: how proteasomes fulfill their role.分子粉碎机:蛋白酶体如何发挥其作用
Curr Opin Struct Biol. 2003 Dec;13(6):665-73. doi: 10.1016/j.sbi.2003.10.005.
9
MolSurfer: A macromolecular interface navigator.MolSurfer:一种大分子界面导航器。
Nucleic Acids Res. 2003 Jul 1;31(13):3349-51. doi: 10.1093/nar/gkg588.
10
Structure and reactivity of an asymmetric complex between HslV and I-domain deleted HslU, a prokaryotic homolog of the eukaryotic proteasome.HslV与I结构域缺失的HslU(真核蛋白酶体的原核同源物)之间不对称复合物的结构与反应活性
J Mol Biol. 2003 Jul 4;330(2):185-95. doi: 10.1016/s0022-2836(03)00580-1.