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4-苯乙烯基吡啶的从头算静态和分子动力学研究

Ab initio static and molecular dynamics study of 4-styrylpyridine.

作者信息

Lawson Daku Latévi M, Linares Jorge, Boillot Marie-Laure

机构信息

Département de chimie physique, Université de Genève, 30 quai Ernest-Ansermet, CH-1211 Genève 4, Switzerland.

出版信息

Chemphyschem. 2007 Jun 25;8(9):1402-16. doi: 10.1002/cphc.200700117.

Abstract

We report an in-depth theoretical study of 4-styrylpyridine in its singlet S(0) ground state. The geometries and the relative stabilities of the trans and cis isomers were investigated within density functional theory (DFT) as well as within Hartree-Fock (HF), second-order Møller-Plesset (MP2), and coupled cluster (CC) theories. The DFT calculations were performed using the B3LYP and PBE functionals, with basis sets of different qualities, and gave results that are very consistent with each other. The molecular structure is thus predicted to be planar at the energy minimum, which is associated with the trans conformation, and to become markedly twisted at the minimum of higher energy, which is associated with the cis conformation. The results of the calculations performed with the post-HF methods approach those obtained with the DFT methods, provided that the level of treatment of the electronic correlation is high enough and that sufficiently flexible basis sets are used. Calculations carried out within DFT also allowed the determination of the geometry and the energy of the molecule at the biradicaloid transition state associated with the thermal cis=trans isomerization and at the transition states associated with the enantiomerization of the cis isomer and with the rotations of the pyridinyl and phenyl groups in the trans and cis isomers. Car-Parrinello molecular dynamics simulations were also performed at 50, 150, and 300 K using the PBE functional. The studies allowed us to evidence the highly flexible nature of the molecule in both conformations. In particular, the trans isomer was found to exist mainly in a nonplanar form at finite temperatures, while the rotation of the pyridinyl ring in the cis isomer was incidentally observed to take place within approximately 1 ps during the simulation carried out at 150 K on this isomer.

摘要

我们报告了对处于单重态S(0)基态的4-苯乙烯基吡啶的深入理论研究。在密度泛函理论(DFT)以及哈特里-福克(HF)、二阶莫勒-普列斯特定理(MP2)和耦合簇(CC)理论框架内,研究了反式和顺式异构体的几何结构和相对稳定性。使用B3LYP和PBE泛函以及不同质量的基组进行了DFT计算,得到的结果彼此非常一致。因此预测分子结构在能量最低处为平面结构,这与反式构象相关,而在能量较高的最低点处会明显扭曲,这与顺式构象相关。只要电子相关处理水平足够高且使用足够灵活的基组,用后HF方法进行的计算结果就接近用DFT方法获得的结果。在DFT框架内进行的计算还能够确定与热顺-反异构化相关的双自由基过渡态以及与顺式异构体对映异构化以及反式和顺式异构体中吡啶基和苯基旋转相关的过渡态下分子的几何结构和能量。还使用PBE泛函在50、150和300 K下进行了Car-Parrinello分子动力学模拟。这些研究使我们能够证明该分子在两种构象下都具有高度的灵活性。特别是,发现反式异构体在有限温度下主要以非平面形式存在,而在对顺式异构体在150 K下进行的模拟过程中,偶然观察到顺式异构体中吡啶基环的旋转在大约1 ps内发生。

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