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药物溶解度的计算机模拟预测。3. 纯无定形物质中的溶剂化自由能。

In silico prediction of drug solubility. 3. Free energy of solvation in pure amorphous matter.

作者信息

Lüder Kai, Lindfors Lennart, Westergren Jan, Nordholm Sture, Kjellander Roland

机构信息

Department of Chemistry, Göteborg University, Göteborg, Sweden.

出版信息

J Phys Chem B. 2007 Jun 28;111(25):7303-11. doi: 10.1021/jp071687d. Epub 2007 Jun 6.

Abstract

The solubility of drugs in water is investigated in a series of papers. In this work, we address the process of bringing a drug molecule from the vapor into a pure drug amorphous phase. This step enables us to actually calculate the solubility of amorphous drugs in water. In our general approach, we, on one hand, perform rigorous free energy simulations using a combination of the free energy perturbation and thermodynamic integration methods. On the other hand, we develop an approximate theory containing parameters that are easily accessible from conventional Monte Carlo simulations, thereby reducing the computation time significantly. In the theory for solvation, we assume that DeltaG* = DeltaGcav + ELJ + EC/2, where the free energy of cavity formation, DeltaGcav, in pure drug systems is obtained using a theory for hard-oblate spheroids, and ELJ and EC are the Lennard-Jones and Coulomb interaction energies between the chosen molecule and the others in the fluid. The theoretical predictions for the free energy of solvation in pure amorphous matter are in good agreement with free energy simulation data for 46 different drug molecules. These results together with our previous studies support our theoretical approach. By using our previous data for the free energy of hydration, we compute the total free energy change of bringing a molecule from the amorphous phase into water. We obtain good agreement between the theory and simulations. It should be noted that to obtain accurate results for the total process, high precision data are needed for the individual subprocesses. Finally, for eight different substances, we compare the experimental amorphous and crystalline solubility in water with the results obtained by the proposed theory with reasonable success.

摘要

一系列论文对药物在水中的溶解度进行了研究。在这项工作中,我们研究了将药物分子从气相转变为纯药物非晶相的过程。这一步骤使我们能够实际计算非晶态药物在水中的溶解度。在我们的一般方法中,一方面,我们使用自由能微扰和热力学积分方法相结合进行严格的自由能模拟。另一方面,我们开发了一种近似理论,该理论包含可从传统蒙特卡罗模拟中轻松获取的参数,从而显著减少了计算时间。在溶剂化理论中,我们假设ΔG* = ΔGcav + ELJ + EC/2,其中在纯药物系统中,空穴形成自由能ΔGcav使用硬扁球体理论获得,ELJ和EC是所选分子与流体中其他分子之间的 Lennard-Jones 相互作用能和库仑相互作用能。纯非晶态物质中溶剂化自由能的理论预测与 46 种不同药物分子的自由能模拟数据吻合良好。这些结果与我们之前的研究共同支持了我们的理论方法。通过使用我们之前关于水合自由能的数据,我们计算了将分子从非晶相带入水中的总自由能变化。我们在理论和模拟之间取得了良好的一致性。需要注意的是,为了获得整个过程的准确结果,各个子过程需要高精度的数据。最后,对于八种不同的物质,我们将实验测得的非晶态和晶态在水中的溶解度与所提出理论得到的结果进行了比较,取得了合理的成功。

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