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猪胰岛素样生长因子结合蛋白、酸不稳定亚基基因的特征:全长cDNA和DNA序列、多态性及表达谱

Characterization of the porcine insulin-like growth factor-binding protein, acid-labile subunit gene: full-length cDNA and DNA sequence, polymorphisms and expression profile.

作者信息

Li S, Ren J, Huang L

机构信息

Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, China.

出版信息

J Anim Breed Genet. 2007 Jun;124(3):133-8. doi: 10.1111/j.1439-0388.2007.00645.x.

DOI:10.1111/j.1439-0388.2007.00645.x
PMID:17550354
Abstract

Insulin-like growth factor-binding protein acid-labile subunit (IGFALS) is an important glycoprotein in the circulation complex for insulin-like growth factors-I and -II (IGFs). So far only a partial porcine IGFALS sequence is available. We herein report the isolation, characterization, polymorphism identification and expression analysis of the porcine IGFALS gene. A 2000-bp full-length cDNA sequence was determined with 5'- and 3'-Rapid Amplification of cDNA End (RACE) assay. It contains a 1821-bp open reading frame encoding a protein of 606 amino acids with a calculated molecular mass of 66 kDa and a theoretical isoelectric point of 6.89. The deduced IGFALS protein shares high identity (70-80%) with other mammalian IGFALS. We also obtained a full-length genomic DNA sequence of the gene. Similar to the other mammalian orthologues, particularly in terms of exon size and exon/intron boundaries, the porcine IGFALS gene spans a transcription unit of 2990 bp, consisting of two exons and one intron. Three single nucleotide polymorphisms (synonymous mutations) were identified in the DNA sequence. RT-PCR assays indicate that IGFALS is expressed ubiquitously in pigs and transcripts are particularly abundant in the liver, lung, white adipose tissue, prostate, epididymis, thyroid and bladder.

摘要

胰岛素样生长因子结合蛋白酸不稳定亚基(IGFALS)是胰岛素样生长因子-I和-II(IGFs)循环复合物中的一种重要糖蛋白。到目前为止,仅获得了部分猪IGFALS序列。我们在此报告猪IGFALS基因的分离、表征、多态性鉴定及表达分析。通过5'-和3'-cDNA末端快速扩增(RACE)测定法确定了一个2000 bp的全长cDNA序列。它包含一个1821 bp的开放阅读框,编码一个606个氨基酸的蛋白质,计算分子量为66 kDa,理论等电点为6.89。推导的IGFALS蛋白与其他哺乳动物的IGFALS具有高度同源性(70-80%)。我们还获得了该基因的全长基因组DNA序列。与其他哺乳动物的直系同源物相似,特别是在外显子大小和外显子/内含子边界方面,猪IGFALS基因跨越一个2990 bp的转录单元,由两个外显子和一个内含子组成。在DNA序列中鉴定出三个单核苷酸多态性(同义突变)。RT-PCR分析表明,IGFALS在猪体内广泛表达,转录本在肝脏、肺、白色脂肪组织、前列腺、附睾、甲状腺和膀胱中特别丰富。

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