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在果蝇巴氏簇物种中,DBC - 150卫星DNA家族的均质化速率较低,且仅限于一对微染色体。

Low rates of homogenization of the DBC-150 satellite DNA family restricted to a single pair of microchromosomes in species from the Drosophila buzzatii cluster.

作者信息

Kuhn Gustavo C S, Franco Fernando F, Manfrin Maura H, Moreira-Filho Orlando, Sene Fabio M

机构信息

Departamento de Genética e Evolução, Universidade Federal de São Carlos, Via Washington Luís, Km 235, 13565-905, São Carlos, SP, Brazil.

出版信息

Chromosome Res. 2007;15(4):457-69. doi: 10.1007/s10577-007-1138-x. Epub 2007 May 15.

Abstract

A satellite DNA family, termed DBC-150, comprises slightly GC-rich repeat units of approximately 150 bp that were isolated (by DNA digestions or PCR) from the genome of all seven Drosophila species from the buzzatii cluster (repleta group). The presence of subrepeats suggests that part of the extant DBC-150 monomer originated by the duplication of small sequence motifs. The DBC-150 family is compared to the previously described pBuM satDNA family, an abundant component of the genome of five species of the cluster. The two families are different in several aspects, including primary structure, A + T content, intraspecific and interspecific variability and rates of homogenization (or nucleotide spread). The data indicate a lower rate of homogenization (and absence of complete concerted evolution) of the DBC-150 compared to the pBuM family. FISH on metaphase chromosomes revealed that the DBC-150 family is located exclusively in the microchromosomes. To our knowledge this is the first record of a complex Drosophila satDNA restricted to a single pair of microchromosomes. The observed low rates of homogenization of the DBC-150 family might be related to a presumed reduction or suppression of meiotic recombination in the microchromosomes.

摘要

一个名为DBC - 150的卫星DNA家族,由富含GC的约150 bp重复单元组成,这些重复单元是通过DNA消化或PCR从布扎蒂簇(repleta组)的所有七种果蝇物种的基因组中分离出来的。亚重复序列的存在表明,现存DBC - 150单体的一部分起源于小序列基序的重复。将DBC - 150家族与先前描述的pBuM卫星DNA家族进行了比较,pBuM卫星DNA家族是该簇中五个物种基因组的丰富组成部分。这两个家族在几个方面存在差异,包括一级结构、A + T含量、种内和种间变异性以及同质化(或核苷酸扩散)速率。数据表明,与pBuM家族相比,DBC - 150的同质化速率较低(且不存在完全的协同进化)。中期染色体的荧光原位杂交显示,DBC - 150家族仅位于微小染色体中。据我们所知,这是果蝇复杂卫星DNA局限于一对微小染色体的首次记录。观察到的DBC - 150家族较低的同质化速率可能与微小染色体中减数分裂重组的假定减少或抑制有关。

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