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[通过定量竞争PCR对废水处理系统中有效菌株红球菌Em1的功能分析]

[Function analysis of the effective strain Rhodococcus ruber Em1 in wastewater treatment system by quantitative competitive PCR].

作者信息

Huang Ling, Li Xi-wu, Li Xu-dong, Liu Shuang-jiang, Liu Zhi-pei, Tan Zhou-liang

机构信息

Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, China.

出版信息

Wei Sheng Wu Xue Bao. 2007 Apr;47(2):307-12.

Abstract

A quantitative competitive PCR (QC-PCR) system was developed to quantify the number and analyze the function of the Rhodococcus ruber Em1 strain in a wastewater treatment system in Nanchong oil refinery plant. Strain Em1 was able to degrade various kinds of hydrocarbons and aromatic compounds with high efficiency and produce bioemulsifier, so it was introduced into the waste liquid petroleum-disposing system. The sediment samples were collected from the disposing system in the range of 5 months, and then the numbers of strain Eml and degrading efficiencies were studied. The results showed that the primers based on 16S rRNA gene sequence of strain Em1 were specific at species level. The PCR products amplified from sediment total DNA with the specific primers were cloned and sequenced, in which 62.2% were the fragments of 16S rRNA gene of strain Em1. Furthermore, the number of Em1 strain ranging from 3.4 x 10(5) - 4.3 x 10(8) CFU/g in the sediment samples were detected, which indicated that the strain Eml added into purposely did exist stably and reproduced well in the waste-deposing system during a long period. The high relativity, with relative coefficient R2 of 0.89, between Eml cell number and the amount of COD (Chemical Oxygen Demand) removal proved that the strain Em1 played an important role in this bio-augmentation treatment system.

摘要

开发了一种定量竞争PCR(QC-PCR)系统,用于量化南充炼油厂废水处理系统中红球菌Em1菌株的数量并分析其功能。Em1菌株能够高效降解各种烃类和芳香族化合物并产生生物乳化剂,因此被引入废油处理系统。在5个月内从处理系统中采集沉积物样本,然后研究Em1菌株的数量和降解效率。结果表明,基于Em1菌株16S rRNA基因序列的引物在种水平上具有特异性。用特异性引物从沉积物总DNA中扩增的PCR产物被克隆并测序,其中62.2%是Em1菌株16S rRNA基因的片段。此外,在沉积物样本中检测到Em1菌株的数量在3.4×10⁵ - 4.3×10⁸ CFU/g之间,这表明特意添加的Em1菌株在废油处理系统中长时间稳定存在且繁殖良好。Em1细胞数量与化学需氧量(COD)去除量之间的高度相关性(相关系数R²为0.89)证明Em1菌株在该生物强化处理系统中发挥了重要作用。

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