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丹参单萜合酶中底物与产物特异性的合理转变:萜类合酶功能进化的结构解析

Rational conversion of substrate and product specificity in a Salvia monoterpene synthase: structural insights into the evolution of terpene synthase function.

作者信息

Kampranis Sotirios C, Ioannidis Daphne, Purvis Alan, Mahrez Walid, Ninga Ederina, Katerelos Nikolaos A, Anssour Samir, Dunwell Jim M, Degenhardt Jörg, Makris Antonios M, Goodenough Peter W, Johnson Christopher B

机构信息

Department of Natural Products and Biotechnology, Mediterranean Agronomic Institute of Chania, Chania, Greece.

出版信息

Plant Cell. 2007 Jun;19(6):1994-2005. doi: 10.1105/tpc.106.047779. Epub 2007 Jun 8.

DOI:10.1105/tpc.106.047779
PMID:17557809
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1955729/
Abstract

Terpene synthases are responsible for the biosynthesis of the complex chemical defense arsenal of plants and microorganisms. How do these enzymes, which all appear to share a common terpene synthase fold, specify the many different products made almost entirely from one of only three substrates? Elucidation of the structure of 1,8-cineole synthase from Salvia fruticosa (Sf-CinS1) combined with analysis of functional and phylogenetic relationships of enzymes within Salvia species identified active-site residues responsible for product specificity. Thus, Sf-CinS1 was successfully converted to a sabinene synthase with a minimum number of rationally predicted substitutions, while identification of the Asn side chain essential for water activation introduced 1,8-cineole and alpha-terpineol activity to Salvia pomifera sabinene synthase. A major contribution to product specificity in Sf-CinS1 appears to come from a local deformation within one of the helices forming the active site. This deformation is observed in all other mono- or sesquiterpene structures available, pointing to a conserved mechanism. Moreover, a single amino acid substitution enlarged the active-site cavity enough to accommodate the larger farnesyl pyrophosphate substrate and led to the efficient synthesis of sesquiterpenes, while alternate single substitutions of this critical amino acid yielded five additional terpene synthases.

摘要

萜类合酶负责植物和微生物复杂化学防御武器库的生物合成。这些酶似乎都具有共同的萜类合酶折叠结构,它们是如何确定几乎完全由仅三种底物之一生成的众多不同产物的呢?对来自灌木鼠尾草(Sf-CinS1)的1,8-桉叶素合酶结构的阐明,结合对鼠尾草属物种内酶的功能和系统发育关系的分析,确定了负责产物特异性的活性位点残基。因此,通过最少数量的合理预测替换,Sf-CinS1成功转化为一种桧烯合酶,而对水激活至关重要的天冬酰胺侧链的鉴定,为波状鼠尾草桧烯合酶引入了1,8-桉叶素和α-萜品醇活性。Sf-CinS1中产物特异性的一个主要贡献似乎来自形成活性位点的螺旋之一内的局部变形。在所有其他可用的单萜或倍半萜结构中都观察到了这种变形,这表明存在一种保守机制。此外,单个氨基酸替换使活性位点腔扩大到足以容纳更大的法呢基焦磷酸底物,并导致倍半萜的高效合成,而对这个关键氨基酸的交替单替换产生了另外五种萜类合酶。

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