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从胰蛋白酶肽的第二种同位素预测串联电喷雾电离质谱中的产物离子同位素比:血红蛋白卡姆登β131谷氨酰胺→谷氨酸变体的鉴定

Prediction of product ion isotope ratios in the tandem electrospray ionization mass spectra from the second isotope of tryptic peptides: identification of the variant beta 131 Gln-->Glu, hemoglobin Camden.

作者信息

Green Brian N, Williams Jonathan P

机构信息

Waters Corporation, Simonsway, Manchester, United Kingdom.

出版信息

J Am Soc Mass Spectrom. 2007 Aug;18(8):1493-8. doi: 10.1016/j.jasms.2007.05.005. Epub 2007 May 17.

DOI:10.1016/j.jasms.2007.05.005
PMID:17583531
Abstract

Many human hemoglobin variants occur in heterozygotes; that is, the variant and normal hemoglobins are present in the same sample. In a procedure for rapidly identifying such variants by mass spectrometry, mutations that increase the mass by 1 Da require a special approach. One of the steps in this procedure involves digesting the denatured hemoglobin with trypsin and analyzing the resulting peptide mixture by mass spectrometry to identify the mutant peptide. Generally the mutant peptide ion can then be selected as the precursor and sequenced by tandem mass spectrometry to identify or confirm the mutation. However, with heterozygotes in which the mass of the variant is 1 Da higher than normal, the first isotope of the mutant peptide occurs at essentially the same mass as the second isotope of the normal peptide, precluding analysis of the mutant peptide on its own. Product ions from the second isotope of a peptide are doublets, 1 Da apart. The way in which the relative abundance of the components in these doublets varies with the elemental composition of the product ions was predicted from the isotopic abundance of the elements and agreed well with experimental data. These results were applied to the identification of a variant that increases the mass by 1 Da in a heterozygote-that is, beta 131 Gln-->Glu, hemoglobin Camden.

摘要

许多人类血红蛋白变体以杂合子形式存在;也就是说,变体血红蛋白和正常血红蛋白存在于同一样本中。在一种通过质谱快速鉴定此类变体的方法中,质量增加1道尔顿(Da)的突变需要一种特殊方法。该方法的步骤之一包括用胰蛋白酶消化变性血红蛋白,并通过质谱分析所得的肽混合物以鉴定突变肽。通常,然后可以选择突变肽离子作为前体,并通过串联质谱进行测序以鉴定或确认突变。然而,对于变体质量比正常质量高1 Da的杂合子,突变肽的第一个同位素出现在与正常肽的第二个同位素基本相同的质量处,从而无法单独分析突变肽。肽的第二个同位素产生的产物离子是相隔1 Da的双峰。根据元素的同位素丰度预测了这些双峰中各组分的相对丰度随产物离子元素组成的变化方式,并且与实验数据吻合良好。这些结果被应用于鉴定杂合子中质量增加1 Da的一种变体,即β131谷氨酰胺→谷氨酸,血红蛋白卡姆登。

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本文引用的文献

1
Accurate mass measurement by electrospray ionization quadrupole mass spectrometry: detection of variants differing by <6 Da from normal in human hemoglobin heterozygotes.
Anal Chem. 2003 May 1;75(9):1978-82. doi: 10.1021/ac026228h.
2
Rapid identification of hemoglobin variants by electrospray ionization mass spectrometry.通过电喷雾电离质谱法快速鉴定血红蛋白变体
Blood Cells Mol Dis. 2001 May-Jun;27(3):691-704. doi: 10.1006/bcmd.2001.0430.
3
Letter: Amino-acid substitution in the alpha 1 beta 1 intersubunit contact of haemoglobin-Camden beta 131 (h9) g1n leads to g1u.信函:血红蛋白-卡姆登β131(h9)g1n的α1β1亚基间接触处的氨基酸取代导致g1u变为g1u。 (注:原文中“g1u”重复且表述奇怪,可能存在错误,但按照要求严格翻译)
Nature. 1973 Jun 22;243(5408):467-8. doi: 10.1038/243467a0.