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用于从生物样品的扩散编辑核磁共振谱中改进信息恢复的统计相关和投影方法。

Statistical correlation and projection methods for improved information recovery from diffusion-edited NMR spectra of biological samples.

作者信息

Smith Leon M, Maher Anthony D, Cloarec Olivier, Rantalainen Mattias, Tang Huiru, Elliott Paul, Stamler Jeremiah, Lindon John C, Holmes Elaine, Nicholson Jeremy K

机构信息

Department of Biomolecular Medicine, Division of Surgery, Oncology, Reproductive Biology & Anaesthetics, Faculty of Medicine, Imperial College London, London, SW7 2AZ, UK.

出版信息

Anal Chem. 2007 Aug 1;79(15):5682-9. doi: 10.1021/ac0703754. Epub 2007 Jun 23.

Abstract

Although NMR spectroscopic techniques coupled with multivariate statistics can yield much useful information for classifying biological samples based on metabolic profiles, biomarker identification remains a time-consuming and complex procedure involving separation methods, two-dimensional NMR, and other spectroscopic tools. We present a new approach to aid complex biomixture analysis that combines diffusion ordered (DO) NMR spectroscopy with statistical total correlation spectroscopy (STOCSY) and demonstrate its application in the characterization of urinary biomarkers and enhanced information recovery from plasma NMR spectra. This method relies on calculation and display of the covariance of signal intensities from the various nuclei on the same molecule across a series of spectra collected under different pulsed field gradient conditions that differentially attenuate the signal intensities according to translational molecular diffusion rates. We term this statistical diffusion-ordered spectroscopy (S-DOSY). We also have developed a new visualization tool in which the apparent diffusion coefficients from DO spectra are projected onto a 1D NMR spectrum (diffusion-ordered projection spectroscopy, DOPY). Both methods either alone or in combination have the potential for general applications to any complex mixture analysis where the sample contains compounds with a range of diffusion coefficients.

摘要

尽管核磁共振光谱技术与多元统计相结合,能够基于代谢谱为生物样品分类提供许多有用信息,但生物标志物的识别仍然是一个耗时且复杂的过程,涉及分离方法、二维核磁共振以及其他光谱工具。我们提出了一种新方法来辅助复杂生物混合物分析,该方法将扩散排序(DO)核磁共振光谱与统计全相关光谱(STOCSY)相结合,并展示了其在尿生物标志物表征以及从血浆核磁共振光谱中增强信息恢复方面的应用。此方法依赖于在不同脉冲场梯度条件下收集的一系列光谱中,计算并显示同一分子上不同原子核信号强度的协方差,这些条件会根据分子平移扩散速率对信号强度进行不同程度的衰减。我们将此称为统计扩散排序光谱(S-DOSY)。我们还开发了一种新的可视化工具,其中将DO光谱的表观扩散系数投影到一维核磁共振光谱上(扩散排序投影光谱,DOPY)。这两种方法单独使用或结合使用,都有潜力广泛应用于任何复杂混合物分析,只要样品中含有具有一系列扩散系数的化合物。

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