Abu-Abed Mona, Das Rahul, Wang Lijun, Melacini Giuseppe
Department of Chemistry, McMaster University, Hamilton, Ontario, Canada L8S 4M1.
Proteins. 2007 Oct 1;69(1):112-24. doi: 10.1002/prot.21446.
The Regulatory (R) subunit of Protein Kinase A (PKA) inhibits its kinase activity by shielding the Catalytic (C) subunit from physiological substrates. This inhibition is reversed in response to extra-cellular signals that increase cAMP levels in the cytoplasm. Upon cAMP binding to R, C is allosterically released from R, activating a spectrum of downstream signaling cascades. Crystallographic data indicated that a series of distinct conformational changes within CBD-A must occur to relay the cAMP signal from the cAMP binding site to the R:C interaction interface. One critical cAMP relay site within the CBD-A of R has been identified as Asp170 because the D170A mutation selectively reduces the negative cooperativity between the cAMP- and C-recognition sites (i.e. the KD for the R:C complex in the presence of cAMP is reduced by more than 12-fold), without significantly compromising the high affinity of R for both binding partners. Here, utilizing an integrated set of comparative NMR analyses we have elucidated how this critical electrostatic switch is able to control the interaction network which transmits the cAMP signal within CBD-A. The D170A-induced variations in backbone chemical shifts as well as in hydrogen-deuterium and hydrogen-hydrogen exchange profiles show that Asp170 not only plays a pivotal role in controlling the local conformation of the phosphate binding cassette (PBC), where cAMP docks, but also significantly affects the long-range cAMP-dependent interaction network that extends from the PBC to the three major sites of C-recognition. We also found that the D170A mutation promotes partial unfolding, thus assisting the uncoupling of the alpha- and beta-subdomains of CBD-A as required for the major alpha-helical conformational re-arrangement necessary for C-binding. Overall, the emerging map of allosteric networks features Asp170 as an essential component of an electrostatic switch mechanism that stabilizes the conformation of the PBC region for optimal interaction with cAMP and that is also crucial for relaying allosteric effects leading to C subunit activation. Taken together, our results consolidate the interdependence between the Asp170 relay site and the R:C interaction interface. Furthermore, they provide insight into the driving forces for the in vivo formation of intermediate PKA ternary complexes. Finally, our current study is relevant for elucidating the antagonistic properties of Rp-cAMPS on PKA by providing a detailed picture of the long-range effects of the altered interaction between this analog and the PBC.
蛋白激酶A(PKA)的调节(R)亚基通过将催化(C)亚基与生理底物隔离来抑制其激酶活性。这种抑制作用会随着细胞外信号使细胞质中cAMP水平升高而逆转。当cAMP与R结合时,C从R上变构释放,激活一系列下游信号级联反应。晶体学数据表明,CBD-A内必须发生一系列不同的构象变化,才能将cAMP信号从cAMP结合位点传递到R:C相互作用界面。R的CBD-A内一个关键的cAMP中继位点已被确定为Asp170,因为D170A突变选择性地降低了cAMP识别位点和C识别位点之间的负协同性(即存在cAMP时R:C复合物的KD降低了12倍以上),而不会显著影响R对两个结合伙伴的高亲和力。在此,我们利用一套综合的比较核磁共振分析方法,阐明了这个关键的静电开关如何能够控制在CBD-A内传递cAMP信号的相互作用网络。D170A诱导的主链化学位移以及氢-氘和氢-氢交换谱的变化表明,Asp170不仅在控制cAMP停靠的磷酸结合盒(PBC)的局部构象中起关键作用,而且还显著影响从PBC延伸到C识别的三个主要位点的远程cAMP依赖性相互作用网络。我们还发现,D170A突变促进了部分解折叠,从而有助于CBD-A的α和β亚结构域按C结合所需的主要α螺旋构象重排要求解偶联。总体而言,新出现的变构网络图谱显示,Asp170是静电开关机制的重要组成部分,该机制稳定PBC区域的构象以实现与cAMP的最佳相互作用,并且对于传递导致C亚基激活的变构效应也至关重要。综上所述,我们的结果巩固了Asp170中继位点与R:C相互作用界面之间的相互依赖性。此外,它们还深入了解了体内形成中间PKA三元复合物的驱动力。最后,我们目前的研究通过提供该类似物与PBC之间相互作用改变的远程效应的详细情况,对于阐明Rp-cAMPS对PKA的拮抗特性具有重要意义。