Schulz Daniela M, Kalkhof Stefan, Schmidt Andreas, Ihling Christian, Stingl Christoph, Mechtler Karl, Zschörnig Olaf, Sinz Andrea
Biotechnological-Biomedical Center, Faculty of Chemistry and Mineralogy, University of Leipzig, D-04103 Leipzig, Germany.
Proteins. 2007 Nov 1;69(2):254-69. doi: 10.1002/prot.21445.
During the past few years, the structural analysis of proteins and protein complexes by chemical crosslinking and mass spectrometry has enjoyed increasing popularity. With this approach we have investigated the quaternary structure of the complex between annexin A2 and p11, which is involved in numerous cellular processes. Although high-resolution data are available for both interaction partners as well as for the complex between two p11 subunits and two annexin A2 N-terminal peptides, the structure of the complete annexin A2/p11 heterotetramer has not yet been solved at high resolution. Thus, the quaternary structure of the biologically relevant, membrane-bound annexin A2/p11 complex is still under discussion, while the existence of a heterotetramer or a heterooctamer is the prevailing opinion. We gained further insight into the spatial organization of the annexin A2/p11 heterotetramer by employing chemical crosslinking combined with high-resolution mass spectrometry. Furthermore, tandem mass spectrometry served as a tool for an exact localization of crosslinked amino acid residues and for a confirmation of crosslinked product assignment. On the basis of distance constraints from the crosslinking data we derived structural models of the annexin A2/p11 heterotetramer by computational docking with Rosetta. We propose an octameric model for the annexin A2/p11 complex, which exerts annexin A2 function. The proposed structure of the annexin A2/p11 octamer differs from so far suggested models and sheds new light into annexin A2/p11 interaction.
在过去几年中,通过化学交联和质谱对蛋白质及蛋白质复合物进行结构分析越来越受到欢迎。利用这种方法,我们研究了膜联蛋白A2与p11之间复合物的四级结构,该复合物参与众多细胞过程。尽管对于两个相互作用伙伴以及两个p11亚基与两个膜联蛋白A2 N端肽之间的复合物都有高分辨率数据,但完整的膜联蛋白A2/p11异源四聚体的结构尚未得到高分辨率解析。因此,生物学上相关的、膜结合的膜联蛋白A2/p11复合物的四级结构仍在讨论中,而异源四聚体或异源八聚体的存在是主流观点。我们通过结合化学交联与高分辨率质谱,进一步深入了解了膜联蛋白A2/p11异源四聚体的空间组织。此外,串联质谱作为一种工具,用于交联氨基酸残基的精确定位以及交联产物归属的确认。基于交联数据的距离限制,我们通过与Rosetta进行计算对接得出了膜联蛋白A2/p11异源四聚体的结构模型。我们提出了一种膜联蛋白A2/p11复合物的八聚体模型,该模型发挥膜联蛋白A2的功能。所提出的膜联蛋白A2/p11八聚体结构不同于迄今所建议的模型,并为膜联蛋白A2/p11相互作用提供了新的见解。