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First detection of a human astrovirus type 8 in a child with diarrhea in Belém, Brazil: comparison with other strains worldwide and identification of possible three lineages.

作者信息

Gabbay Yvone B, Linhares Alexandre C, Oliveira Darleise S, Nakamura Lilian S, Mascarenhas Joana D'Arc P, Gusmão Rosa Helena P, Heinemann Marcos B, Macêdo Olinda, Leite José Paulo G

机构信息

Secão de Virologia, Instituto Evandro Chagas, Secretaria de Vigilância em Saúde, Ministério da Saúde, Ananindeua, PA, 67030-000, Brasil.

出版信息

Mem Inst Oswaldo Cruz. 2007 Jun;102(4):531-4. doi: 10.1590/s0074-02762007005000032.

Abstract

This study describes the genetic relationships of the first human astrovirus type-8 (HAstV-8) detected in Belém-Brazil, during a public hospital-based study. This strain was compared with other HAstV-8 strains identified elsewhere which have sequences available at GeneBank. The regions ORF1a (primers Mon348/Mon340) and ORF2 (primers Mon269/Mon270) were analyzed by nucleotide sequencing and a high similarity rate was observed among the Belém strain and other HAstV-8 strains. In ORF1a, homology values of 93-100% were detected, and in ORF2 96-99%. Considering the sequence variation (7%) observed in ORF2 region, it was suggested that HAstV-8 strains could be divided in three different lineages.

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