影响丙型肝炎病毒感染与复制的细胞辅助因子

Cellular cofactors affecting hepatitis C virus infection and replication.

作者信息

Randall Glenn, Panis Maryline, Cooper Jacob D, Tellinghuisen Timothy L, Sukhodolets Karen E, Pfeffer Sebastien, Landthaler Markus, Landgraf Pablo, Kan Sherry, Lindenbach Brett D, Chien Minchen, Weir David B, Russo James J, Ju Jingyue, Brownstein Michael J, Sheridan Robert, Sander Chris, Zavolan Mihaela, Tuschl Thomas, Rice Charles M

机构信息

Laboratory of Virology and Infectious Disease, Center for the Study of Hepatitis C, and Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY 10021, USA.

出版信息

Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12884-9. doi: 10.1073/pnas.0704894104. Epub 2007 Jul 6.

Abstract

Recently identified hepatitis C virus (HCV) isolates that are infectious in cell culture provide a genetic system to evaluate the significance of virus-host interactions for HCV replication. We have completed a systematic RNAi screen wherein siRNAs were designed that target 62 host genes encoding proteins that physically interact with HCV RNA or proteins or belong to cellular pathways thought to modulate HCV infection. This includes 10 host proteins that we identify in this study to bind HCV NS5A. siRNAs that target 26 of these host genes alter infectious HCV production >3-fold. Included in this set of 26 were siRNAs that target Dicer, a principal component of the RNAi silencing pathway. Contrary to the hypothesis that RNAi is an antiviral pathway in mammals, as has been reported for subgenomic HCV replicons, siRNAs that target Dicer inhibited HCV replication. Furthermore, siRNAs that target several other components of the RNAi pathway also inhibit HCV replication. MicroRNA profiling of human liver, human hepatoma Huh-7.5 cells, and Huh-7.5 cells that harbor replicating HCV demonstrated that miR-122 is the predominant microRNA in each environment. miR-122 has been previously implicated in positively regulating the replication of HCV genotype 1 replicons. We find that 2'-O-methyl antisense oligonucleotide depletion of miR-122 also inhibits HCV genotype 2a replication and infectious virus production. Our data define 26 host genes that modulate HCV infection and indicate that the requirement for functional RNAi for HCV replication is dominant over any antiviral activity this pathway may exert against HCV.

摘要

最近鉴定出的在细胞培养中具有感染性的丙型肝炎病毒(HCV)分离株提供了一个遗传系统,用于评估病毒-宿主相互作用对HCV复制的重要性。我们已经完成了一项系统性RNA干扰筛选,其中设计了针对62个宿主基因的小干扰RNA(siRNA),这些宿主基因编码与HCV RNA或蛋白质发生物理相互作用或属于被认为可调节HCV感染的细胞途径的蛋白质。这包括我们在本研究中鉴定出的10种与HCV NS5A结合的宿主蛋白。针对其中26个宿主基因的siRNA可使感染性HCV产量改变超过3倍。在这26个基因中,包括靶向RNA干扰沉默途径主要成分Dicer的siRNA。与RNA干扰是哺乳动物中的抗病毒途径这一假设相反(如针对亚基因组HCV复制子所报道的那样),靶向Dicer的siRNA抑制了HCV复制。此外,靶向RNA干扰途径其他几个成分的siRNA也抑制HCV复制。对人肝脏、人肝癌Huh-7.5细胞以及携带复制性HCV的Huh-7.5细胞进行的微小RNA分析表明,miR-122是每种环境中的主要微小RNA。miR-122先前已被证明对HCV 1型复制子的复制具有正向调节作用。我们发现,用2'-O-甲基反义寡核苷酸去除miR-122也会抑制HCV 2a型复制和感染性病毒的产生。我们的数据确定了26个调节HCV感染的宿主基因,并表明HCV复制对功能性RNA干扰的需求比该途径可能对HCV发挥的任何抗病毒活性更为重要。

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