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由于MutM/MutY识别的DNA修饰水平出奇地低,mutT缺陷不会提高大肠杆菌中的染色体片段化水平。

The mutT defect does not elevate chromosomal fragmentation in Escherichia coli because of the surprisingly low levels of MutM/MutY-recognized DNA modifications.

作者信息

Rotman Ella, Kuzminov Andrei

机构信息

Department of Microbiology, University of Illinois at Urbana-Champaign, IL 61801-3709, USA.

出版信息

J Bacteriol. 2007 Oct;189(19):6976-88. doi: 10.1128/JB.00776-07. Epub 2007 Jul 6.

Abstract

Nucleotide pool sanitizing enzymes Dut (dUTPase), RdgB (dITPase), and MutT (8-oxo-dGTPase) of Escherichia coli hydrolyze noncanonical DNA precursors to prevent incorporation of base analogs into DNA. Previous studies reported dramatic AT-->CG mutagenesis in mutT mutants, suggesting a considerable density of 8-oxo-G in DNA that should cause frequent excision and chromosomal fragmentation, irreparable in the absence of RecBCD-catalyzed repair and similar to the lethality of dut recBC and rdgB recBC double mutants. In contrast, we found mutT recBC double mutants viable with no signs of chromosomal fragmentation. Overproduction of the MutM and MutY DNA glycosylases, both acting on DNA containing 8-oxo-G, still yields no lethality in mutT recBC double mutants. Plasmid DNA, extracted from mutT mutM double mutant cells and treated with MutM in vitro, shows no increased relaxation, indicating no additional 8-oxo-G modifications. Our DeltamutT allele elevates the AT-->CG transversion rate 27,000-fold, consistent with published reports. However, the rate of AT-->CG transversions in our mutT(+) progenitor strain is some two orders of magnitude lower than in previous studies, which lowers the absolute rate of mutagenesis in DeltamutT derivatives, translating into less than four 8-oxo-G modifications per genome equivalent, which is too low to cause the expected effects. Introduction of various additional mutations in the DeltamutT strain or treatment with oxidative agents failed to increase the mutagenesis even twofold. We conclude that, in contrast to the previous studies, there is not enough 8-oxo-G in the DNA of mutT mutants to cause elevated excision repair that would trigger chromosomal fragmentation.

摘要

大肠杆菌的核苷酸库净化酶Dut(dUTP酶)、RdgB(dITP酶)和MutT(8-氧代-dGTP酶)可水解非规范的DNA前体,以防止碱基类似物掺入DNA。先前的研究报道了mutT突变体中显著的AT→CG诱变现象,这表明DNA中8-氧代-G的密度相当高,应该会导致频繁的切除和染色体断裂,在缺乏RecBCD催化修复的情况下无法修复,这与dut recBC和rdgB recBC双突变体的致死性类似。相比之下,我们发现mutT recBC双突变体是存活的,没有染色体断裂的迹象。MutM和MutY DNA糖基化酶都作用于含有8-氧代-G的DNA,其过量表达在mutT recBC双突变体中仍然不会导致致死性。从mutT mutM双突变体细胞中提取并在体外经MutM处理的质粒DNA,没有显示出增加的松弛现象,表明没有额外的8-氧代-G修饰。我们的DeltamutT等位基因将AT→CG颠换率提高了27000倍,这与已发表的报告一致。然而,我们的mutT(+)祖细胞株中的AT→CG颠换率比先前的研究低约两个数量级,这降低了DeltamutT衍生物中的绝对诱变率,转化为每个基因组当量中少于四个8-氧代-G修饰,这太低以至于无法产生预期的效果。在DeltamutT菌株中引入各种额外的突变或用氧化剂处理甚至都未能使诱变率增加两倍。我们得出结论,与先前的研究相反,mutT突变体的DNA中没有足够的8-氧代-G来导致切除修复增加从而引发染色体断裂。

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