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与病毒肽和自身肽形成复合物的人类主要组织相容性抗原HLA - B*1402的表达、纯化及初步X射线晶体学分析

Expression, purification and preliminary X-ray crystallographic analysis of the human major histocompatibility antigen HLA-B*1402 in complex with a viral peptide and with a self-peptide.

作者信息

Kumar Pravin, Vahedi-Faridi Ardeschir, Merino Elena, López de Castro José A, Volz Armin, Ziegler Andreas, Saenger Wolfram, Uchanska-Ziegler Barbara

机构信息

Institut für Immungenetik, Charité-Universitätsmedizin Berlin, Humboldt-Universität zu Berlin, Thielallee 73, 14195 Berlin, Germany.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jul 1;63(Pt 7):631-4. doi: 10.1107/S1744309107029077. Epub 2007 Jun 29.

DOI:10.1107/S1744309107029077
PMID:17620730
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2335130/
Abstract

The product of the human major histocompatibility (HLA) class I allele HLA-B1402 only differs from that of allele HLA-B1403 at amino-acid position 156 of the heavy chain (Leu in HLA-B1402 and Arg in HLA-B1403). However, both subtypes are known to be differentially associated with the inflammatory rheumatic disease ankylosing spondylitis (AS) in black populations in Cameroon and Togo. HLA-B1402 is not associated with AS, in contrast to HLA-B1403, which is associated with this disease in the Togolese population. The products of these alleles can present peptides with Arg at position 2, a feature shared by a small group of other HLA-B antigens, including HLA-B2705, the prototypical AS-associated subtype. Complexes of HLA-B1402 with a viral peptide (RRRWRRLTV, termed pLMP2) and a self-peptide (IRAAPPPLF, termed pCatA) were prepared and were crystallized using polyethylene glycol as precipitant. The complexes crystallized in space groups P2(1) (pLMP2) and P2(1)2(1)2(1) (pCatA) and diffracted synchrotron radiation to 2.55 and 1.86 A resolution, respectively. Unambiguous solutions for both data sets were obtained by molecular replacement using a peptide-complexed HLA-B*2705 molecule (PDB code 1jge) as a search model.

摘要

人类主要组织相容性复合体(HLA)I类等位基因HLA - B1402的产物与等位基因HLA - B1403的产物仅在重链的氨基酸位置156处存在差异(HLA - B1402中为亮氨酸,HLA - B1403中为精氨酸)。然而,已知这两种亚型在喀麦隆和多哥的黑人人群中与炎性风湿性疾病强直性脊柱炎(AS)存在不同关联。与HLA - B1403不同,HLA - B1402与AS无关联,HLA - B1403在多哥人群中与该疾病相关。这些等位基因的产物能够呈递在第2位带有精氨酸的肽段,这是包括HLA - B2705(AS相关原型亚型)在内的一小部分其他HLA - B抗原所共有的特征。制备了HLA - B1402与病毒肽(RRRWRRLTV,称为pLMP2)和自身肽(IRAAPPPLF,称为pCatA)的复合物,并使用聚乙二醇作为沉淀剂使其结晶。这些复合物分别在空间群P2(1)(pLMP2)和P2(1)2(1)2(1)(pCatA)中结晶,并分别将同步辐射衍射至2.55 Å和1.86 Å的分辨率。通过使用肽复合的HLA - B2705分子(PDB代码1jge)作为搜索模型进行分子置换,获得了两个数据集的明确解决方案。

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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
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HLA-B27 and the pathogenesis of spondyloarthropathies.HLA - B27与脊柱关节病的发病机制
Immunol Lett. 2007 Jan 15;108(1):27-33. doi: 10.1016/j.imlet.2006.10.004. Epub 2006 Nov 16.
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X-ray diffraction analysis of crystals from the human major histocompatibility antigen HLA-B*2706 in complex with a viral peptide and with a self-peptide.对与病毒肽和自身肽形成复合物的人类主要组织相容性抗原HLA-B*2706晶体的X射线衍射分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Dec 1;61(Pt 12):1097-9. doi: 10.1107/S1744309105037966. Epub 2005 Nov 24.
4
Preliminary X-ray diffraction analysis of crystals from the recombinantly expressed human major histocompatibility antigen HLA-B*2704 in complex with a viral peptide and with a self-peptide.对重组表达的人类主要组织相容性抗原HLA - B*2704与病毒肽及自身肽形成的复合物晶体进行的初步X射线衍射分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Oct 1;61(Pt 10):939-41. doi: 10.1107/S1744309105029234. Epub 2005 Sep 30.
5
Purification, crystallization and preliminary X-ray diffraction analysis of the human major histocompatibility antigen HLA-B*2703 complexed with a viral peptide and with a self-peptide.与病毒肽和自身肽复合的人类主要组织相容性抗原HLA-B*2703的纯化、结晶及初步X射线衍射分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Apr 1;61(Pt 4):372-4. doi: 10.1107/S1744309105007438. Epub 2005 Mar 12.
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Conformational dimorphism of self-peptides and molecular mimicry in a disease-associated HLA-B27 subtype.疾病相关 HLA - B27 亚型中自身肽的构象二态性与分子模拟
J Biol Chem. 2006 Jan 27;281(4):2306-16. doi: 10.1074/jbc.M508528200. Epub 2005 Oct 12.
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Two HLA-B14 subtypes (B*1402 and B*1403) differentially associated with ankylosing spondylitis differ substantially in peptide specificity but have limited peptide and T-cell epitope sharing with HLA-B27.与强直性脊柱炎差异相关的两种HLA - B14亚型(B*1402和B*1403)在肽特异性方面有很大差异,但与HLA - B27的肽和T细胞表位共享有限。
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J Biol Chem. 2005 Jan 28;280(4):2962-71. doi: 10.1074/jbc.M410807200. Epub 2004 Nov 10.