Koropatkin Nicole, Randich Amelia M, Bhattacharyya-Pakrasi Maitrayee, Pakrasi Himadri B, Smith Thomas J
Donald Danforth Plant Science Center, Saint Louis, Missouri 63132 and.
Department of Biology, Washington University, St. Louis, Missouri 63130.
J Biol Chem. 2007 Sep 14;282(37):27468-27477. doi: 10.1074/jbc.M704136200. Epub 2007 Jul 11.
Cyanobacteria account for a significant percentage of aquatic primary productivity even in areas where the concentrations of essential micronutrients are extremely low. To better understand the mechanism of iron selectivity and transport, the structure of the solute binding domain of an ATP binding cassette iron transporter, FutA1, was determined in the presence and absence of iron. The iron ion is bound within the "C-clamp" structure via four tyrosine and one histidine residues. There are extensive interactions between these ligating residues and the rest of the protein such that the conformations of the side chains remain relatively unchanged as the iron is released by the opening of the metal binding cleft. This is in stark contrast to the zinc-binding protein, ZnuA, where the domains of the metal-binding protein remain relatively fixed, whereas the ligating residues rotate out of the binding pocket upon metal release. The rotation of the domains in FutA1 is facilitated by two flexible beta-strands running along the back of the protein that act like a hinge during domain motion. This motion may require relatively little energy since total contact area between the domains is the same whether the protein is in the open or closed conformation. Consistent with the pH dependence of iron binding, the main trigger for iron release is likely the histidine in the iron-binding site. Finally, neither FutA1 nor FutA2 binds iron as a siderophore complex or in the presence of anions, and both preferentially bind ferrous over ferric ions.
即使在必需微量营养素浓度极低的区域,蓝藻在水生初级生产力中也占相当大的比例。为了更好地理解铁选择性和转运的机制,在有铁和无铁的情况下测定了一种ATP结合盒式铁转运蛋白FutA1的溶质结合结构域的结构。铁离子通过四个酪氨酸残基和一个组氨酸残基结合在“C型夹”结构内。这些连接残基与蛋白质的其余部分之间存在广泛的相互作用,使得当金属结合裂隙打开释放铁时,侧链的构象保持相对不变。这与锌结合蛋白ZnuA形成鲜明对比,在ZnuA中,金属结合蛋白的结构域保持相对固定,而连接残基在金属释放时旋转出结合口袋。FutA1中结构域的旋转由沿着蛋白质背面延伸的两条柔性β链促进,这两条链在结构域运动过程中起铰链的作用。这种运动可能只需要相对较少的能量,因为无论蛋白质处于开放构象还是封闭构象,结构域之间的总接触面积都是相同的。与铁结合的pH依赖性一致,铁释放的主要触发因素可能是铁结合位点中的组氨酸。最后,FutA1和FutA2都不以铁载体复合物的形式或在有阴离子存在的情况下结合铁,并且两者都优先结合亚铁离子而非铁离子。