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变性高效液相色谱法在国民医疗服务体系实验室中用于检测原纤蛋白-1基因的突变以诊断马凡综合征的应用。

Application of dHPLC for mutation detection of the fibrillin-1 gene for the diagnosis of Marfan syndrome in a National Health Service Laboratory.

作者信息

Howarth Rachel, Yearwood Catharina, Harvey John F

机构信息

Wessex Regional Genetics Laboratory, Salisbury Hospital NHS Trust, Salisbury, Wiltshire, SP2 8BJ, UK.

出版信息

Genet Test. 2007 Summer;11(2):146-52. doi: 10.1089/gte.2006.0514.

Abstract

Marfan syndrome (MFS) is an autosomal dominant connective tissue disorder caused by mutations in the fibrillin-1 gene FBN1. Mutation detection of this 65-exon gene presents a particular challenge for the diagnostic service in cost, time constraints, and the need to maintain a stringently optimized assay procedure. Using denaturing high-performance liquid chromatography (dHPLC), we have designed a procedure for rapid mutation scanning, redesigning 50% of published primer sets, screening by Ensembl to avoid inclusion of polymorphic variations and employing a limited set of PCR conditions to allow for a high-throughput 96-well format. We have screened 262 unrelated patients with MFS or Marfan-like phenotypes and detected 103 (39.3%) mutations including 93 different mutations, 72 of which are novel. The mutations include 55 missense (53.4%) 19 splice site (18.5%), 17 frameshift (16.5%), 11 nonsense (10.7%) and 1 in-frame deletion/insertion.

摘要

马凡综合征(MFS)是一种常染色体显性遗传性结缔组织疾病,由原纤蛋白-1基因FBN1突变引起。对这个包含65个外显子的基因进行突变检测,在成本、时间限制以及维持严格优化的检测程序方面,给诊断服务带来了特殊挑战。我们采用变性高效液相色谱法(dHPLC)设计了一种快速突变扫描程序,重新设计了50%已发表的引物组,通过Ensembl筛选以避免包含多态性变异,并采用有限的一组PCR条件以实现高通量96孔板检测形式。我们对262例患有马凡综合征或马凡样表型的无关患者进行了筛查,检测到103个(39.3%)突变,包括93种不同突变,其中72种为新发现的突变。这些突变包括55个错义突变(53.4%)、19个剪接位点突变(18.5%)、17个移码突变(16.5%)、11个无义突变(10.7%)和1个框内缺失/插入突变。

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