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使用 PCR-GoldMag 侧流设备对非小细胞肺癌患者的 EGFR 基因突变进行敏感基因分型。

Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device.

机构信息

College of Life Sciences, Northwest University, Xi'an, 710069, China.

School of Medicine, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, 710061, China.

出版信息

Sci Rep. 2017 Aug 21;7(1):8346. doi: 10.1038/s41598-017-08210-8.

DOI:10.1038/s41598-017-08210-8
PMID:28827701
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5566435/
Abstract

Epidermal growth factor receptor (EGFR) mutations predict better outcomes with EGFR tyrosine kinase inhibitors in patients with non-small cell lung cancer (NSCLC). Most common activating mutations include in-frame deletion in exon 19 and L858R substitution in exon 21, which account for >90% of all EGFR mutations in NSCLC. In this study, a PCR-GoldMag lateral flow assay (PCR-GoldMag LFA) was developed for the visual detection of delE746-A750 and L858R of EGFR mutations. Forty formalin-fixed paraffin-embedded (FFPE) tissue samples of NSCLC patients were analyzed using PCR-GoldMag LFA system and verified by direct sequencing and TaqMan-PCR detection methods. Results showed that EGFR mutations were detected in 34 cases among the 40 samples (85%) by PCR-GoldMag LFA method. Among the 34 cases, 5 cases were simultaneously detected with delE746-A750 in exon 19 and L858R mutation in exon 21. Compared with sequencing, only 4 samples were detected as delE746-A750, which revealed higher sensitivity of PCR-GoldMag LFA detection method than direct sequencing. TaqMan-PCR method verified the L858R mutation and was in 100% agreement with our method. These results indicated that our method has obvious advantages to analyze clinical samples and offers a more sensitive alternative to direct sequencing for the detection of EGFR mutations.

摘要

表皮生长因子受体 (EGFR) 突变预测非小细胞肺癌 (NSCLC) 患者使用 EGFR 酪氨酸激酶抑制剂的效果更好。最常见的激活突变包括外显子 19 的框内缺失和外显子 21 的 L858R 取代,这占 NSCLC 中所有 EGFR 突变的>90%。在这项研究中,开发了一种用于 EGFR 突变的德尔 E746-A750 和 L858R 可视化检测的 PCR-GoldMag 侧流分析 (PCR-GoldMag LFA)。使用 PCR-GoldMag LFA 系统分析了 40 例 NSCLC 患者的福尔马林固定石蜡包埋 (FFPE) 组织样本,并通过直接测序和 TaqMan-PCR 检测方法进行了验证。结果表明,PCR-GoldMag LFA 方法在 40 个样本中的 34 个样本 (85%) 中检测到 EGFR 突变。在 34 例中,5 例同时在外显子 19 中检测到德尔 E746-A750 与外显子 21 中的 L858R 突变。与测序相比,仅检测到 4 个样本为德尔 E746-A750,这表明 PCR-GoldMag LFA 检测方法的灵敏度高于直接测序。TaqMan-PCR 方法验证了 L858R 突变,与我们的方法完全一致。这些结果表明,我们的方法在分析临床样本方面具有明显优势,为 EGFR 突变的检测提供了一种比直接测序更敏感的替代方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/80e72f49205f/41598_2017_8210_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/af82077ad3f9/41598_2017_8210_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/d3eb5b8c2473/41598_2017_8210_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/3165cde2513f/41598_2017_8210_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/37595dfa7113/41598_2017_8210_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/80e72f49205f/41598_2017_8210_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/af82077ad3f9/41598_2017_8210_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/d3eb5b8c2473/41598_2017_8210_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/3165cde2513f/41598_2017_8210_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/37595dfa7113/41598_2017_8210_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c794/5566435/80e72f49205f/41598_2017_8210_Fig5_HTML.jpg

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