Parmar Avanish S, Gottschall Paul E, Muschol Martin
Department of Physics, University of South Florida, Tampa, FL 33620 USA.
Biophys Chem. 2007 Sep;129(2-3):224-34. doi: 10.1016/j.bpc.2007.06.002. Epub 2007 Jun 9.
Efficient determination of three-dimensional protein structures is critical for unraveling structure-function relationships and for supporting targeted drug design. A major impediment to these efforts is our lack of control over the nucleation and growth of high-quality protein crystals for X-ray structure determinations. While basic research on protein crystal growth mechanisms has provided valuable new insights, studies of crystal nucleation have been plagued by inconsistent and outright contradictory results. Using dynamic light scattering and SDS gel electrophoresis, we have investigated possible causes of these inconsistencies. We find that commercial sources of lyophilized hen-egg white lysozyme (HEWL) used in nucleation studies contain significant populations of large (approximately 100 nm), pre-assembled lysozyme clusters that can readily evade standard assays of sample purity. In supersaturated solutions, these clusters act as heterogeneous nucleation centers that enhance the rate of crystal nucleation and significantly deteriorate the quality of macroscopic crystals.
高效测定三维蛋白质结构对于阐明结构-功能关系以及支持靶向药物设计至关重要。这些努力的一个主要障碍是我们在用于X射线结构测定的高质量蛋白质晶体的成核和生长方面缺乏控制。虽然对蛋白质晶体生长机制的基础研究提供了有价值的新见解,但晶体成核的研究一直受到不一致甚至完全矛盾的结果的困扰。利用动态光散射和SDS凝胶电泳,我们研究了这些不一致现象的可能原因。我们发现,用于成核研究的冻干鸡蛋白溶菌酶(HEWL)的商业来源含有大量大的(约100纳米)、预组装的溶菌酶聚集体,这些聚集体很容易逃避样品纯度的标准检测。在过饱和溶液中,这些聚集体充当异质成核中心,提高晶体成核速率并显著降低宏观晶体的质量。