Kononenko Artem V, Mitkevich Vladimir A, Dubovaya Vera I, Kolosov Peter M, Makarov Alexander A, Kisselev Lev L
Engelhardt Institute of Molecular Biology, The Russian Academy of Sciences, Moscow 119991, Russia.
Proteins. 2008 Feb 1;70(2):388-93. doi: 10.1002/prot.21544.
Eukaryotic translational termination is triggered by polypeptide release factors eRF1, eRF3, and one of the three stop codons at the ribosomal A-site. Isothermal titration calorimetry shows that (i) the separated MC, M, and C domains of human eRF1 bind to eRF3; (ii) GTP binding to eRF3 requires complex formation with either the MC or M + C domains; (iii) the M domain interacts with the N and C domains; (iv) the MC domain and Mg2+ induce GTPase activity of eRF3 in the ribosome. We suggest that GDP binding site of eRF3 acquires an ability to bind gamma-phosphate of GTP if altered by cooperative action of the M and C domains of eRF1. Thus, the stop-codon decoding is associated with the N domain of eRF1 while the GTPase activity of eRF3 is controlled by the MC domain of eRF1 demonstrating a substantial structural uncoupling of these two activities though functionally they are interrelated.
真核生物翻译终止由多肽释放因子eRF1、eRF3以及核糖体A位点的三个终止密码子之一触发。等温滴定量热法表明:(i)人eRF1分离的MC、M和C结构域与eRF3结合;(ii)GTP与eRF3结合需要与MC或M + C结构域形成复合物;(iii)M结构域与N和C结构域相互作用;(iv)MC结构域和Mg2+诱导核糖体中eRF3的GTPase活性。我们认为,如果eRF1的M和C结构域协同作用改变了eRF3的GDP结合位点,使其获得结合GTPγ-磷酸的能力。因此,终止密码子解码与eRF1的N结构域相关,而eRF3的GTPase活性由eRF1的MC结构域控制,这表明这两种活性在结构上存在实质性解偶联,尽管在功能上它们相互关联。