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脱酰基tRNA对真核生物核糖体终止复合物的稳定作用。

Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA.

作者信息

Susorov Denis, Mikhailova Tatiana, Ivanov Alexander, Sokolova Elizaveta, Alkalaeva Elena

机构信息

Engelhardt Institute of Molecular Biology, the Russian Academy of Sciences, 119991 Moscow, Russia Faculty of Bioengineering and Bioinformatics, M.V. Lomonosov Moscow State University, 119992 Moscow, Russia.

Engelhardt Institute of Molecular Biology, the Russian Academy of Sciences, 119991 Moscow, Russia.

出版信息

Nucleic Acids Res. 2015 Mar 31;43(6):3332-43. doi: 10.1093/nar/gkv171. Epub 2015 Mar 9.

Abstract

Stabilization of the ribosomal complexes plays an important role in translational control. Mechanisms of ribosome stabilization have been studied in detail for initiation and elongation of eukaryotic translation, but almost nothing is known about stabilization of eukaryotic termination ribosomal complexes. Here, we present one of the mechanisms of fine-tuning of the translation termination process in eukaryotes. We show that certain deacylated tRNAs, remaining in the E site of the ribosome at the end of the elongation cycle, increase the stability of the termination and posttermination complexes. Moreover, only the part of eRF1 recognizing the stop codon is stabilized in the A site of the ribosome, and the stabilization is not dependent on the hydrolysis of peptidyl-tRNA. The determinants, defining this property of the tRNA, reside in the acceptor stem. It was demonstrated by site-directed mutagenesis of tRNA(Val) and construction of a mini-helix structure identical to the acceptor stem of tRNA. The mechanism of this stabilization is different from the fixation of the unrotated state of the ribosome by CCA end of tRNA or by cycloheximide in the E site. Our data allow to reveal the possible functions of the isodecoder tRNAs in eukaryotes.

摘要

核糖体复合物的稳定在翻译控制中起着重要作用。对于真核生物翻译的起始和延伸,核糖体稳定机制已得到详细研究,但对于真核生物终止核糖体复合物的稳定几乎一无所知。在此,我们提出了真核生物翻译终止过程微调的一种机制。我们表明,在延伸循环结束时留在核糖体E位点的某些脱酰基tRNA会增加终止和终止后复合物的稳定性。此外,只有识别终止密码子的eRF1部分在核糖体的A位点被稳定,且这种稳定不依赖于肽基-tRNA的水解。决定tRNA这一特性的决定因素位于受体茎。通过对tRNA(Val)进行定点诱变并构建与tRNA受体茎相同的小螺旋结构得以证明。这种稳定机制不同于tRNA的CCA末端或E位点的环己酰亚胺对核糖体未旋转状态的固定。我们的数据有助于揭示真核生物中同功tRNA的可能功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c120/4381076/b1a550ee95e8/gkv171fig1.jpg

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