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周质结合蛋白熔球态的鉴定及热力学表征

Identification and thermodynamic characterization of molten globule states of periplasmic binding proteins.

作者信息

Prajapati Ravindra Singh, Indu S, Varadarajan Raghavan

机构信息

Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India.

出版信息

Biochemistry. 2007 Sep 11;46(36):10339-52. doi: 10.1021/bi700577m. Epub 2007 Aug 15.

Abstract

Molten globule-like intermediates have been shown to occur during protein folding and are thought to be involved in protein translocation and membrane insertion. However, the determinants of molten globule stability and the extent of specific packing in molten globules is currently unclear. Using far- and near-UV CD and intrinsic and ANS fluorescence, we show that four periplasmic binding proteins (LBP, LIVBP, MBP, and RBP) form molten globules at acidic pH values ranging from 3.0 to 3.4. Only two of these (LBP and LIVBP) have similar sequences, but all four proteins adopt similar three-dimensional structures. We found that each of the four molten globules binds to its corresponding ligand without conversion to the native state. Ligand binding affinity measured by isothermal titration calorimetry for the molten globule state of LIVBP was found to be comparable to that of the corresponding native state, whereas for LBP, MBP, and RBP, the molten globules bound ligand with approximately 5-30-fold lower affinity than the corresponding native states. All four molten globule states exhibited cooperative thermal unfolding assayed by DSC. Estimated values of DeltaCp of unfolding show that these molten globule states contain 28-67% of buried surface area relative to the native states. The data suggest that molten globules of these periplasmic binding proteins retain a considerable degree of long range order. The ability of these sequentially unrelated proteins to form highly ordered molten globules may be related to their large size as well as an intrinsic property of periplasmic binding protein folds.

摘要

已证明熔球样中间体在蛋白质折叠过程中出现,并被认为参与蛋白质转运和膜插入。然而,目前尚不清楚熔球稳定性的决定因素以及熔球中特定堆积的程度。利用远紫外和近紫外圆二色光谱以及内源荧光和ANS荧光,我们发现四种周质结合蛋白(LBP、LIVBP、MBP和RBP)在pH值为3.0至3.4的酸性条件下形成熔球。其中只有两种(LBP和LIVBP)具有相似的序列,但所有四种蛋白质都采用相似的三维结构。我们发现,这四种熔球中的每一种都能与其相应的配体结合而不转变为天然状态。通过等温滴定量热法测得的LIVBP熔球状态的配体结合亲和力与相应天然状态的亲和力相当,而对于LBP、MBP和RBP,熔球结合配体的亲和力比相应天然状态低约5至30倍。通过差示扫描量热法测定,所有四种熔球状态均表现出协同热解折叠。解折叠的ΔCp估计值表明,这些熔球状态相对于天然状态含有28%至67%的埋藏表面积。数据表明,这些周质结合蛋白的熔球保留了相当程度的长程有序性。这些序列不相关的蛋白质形成高度有序熔球的能力可能与其较大的尺寸以及周质结合蛋白折叠的固有特性有关。

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