Liu Canhui, de Oliveira Ana, Higazi Tarig B, Ghedin Elodie, DePasse Jay, Unnasch Thomas R
Gorgas Center for Geographic Medicine, Division of Infectious Diseases, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Mol Biochem Parasitol. 2007 Nov;156(1):62-73. doi: 10.1016/j.molbiopara.2007.07.012. Epub 2007 Jul 22.
Many genes in parasitic nematodes are both cis- and trans-spliced. Previous studies have demonstrated that a 7nt element encoded in the first intron of the Brugia malayi 70kDa heat shock protein (BmHSP70) gene was necessary to permit trans-splicing of transgenic mRNAs in embryos transfected with constructs encoding portions of the BmHSP70 gene. Here we demonstrate that this element (the B. malayi HSP70 trans-splicing motif, or BmHSP70 TSM) is necessary and sufficient to direct trans-splicing of transgenic mRNAs derived from two genes naturally containing this motif. Mutations introduced into any position of the BmHSP70 TSM abrogated its ability to direct trans-splicing. Transgenic mRNAs derived from embryos transfected with constructs containing promoters and associated downstream domains from two normally trans-spliced genes that lack a BmHSP70 TSM homologue (the B. malayi 12kDa small subunit ribosomal protein (BmRPS12) gene and the B. malayi RNA-binding protein (BmRBP1) gene), were not trans-spliced. Transfer of the BmHSP70 TSM into the first intron of the BmRPS12 gene rendered it competent for trans-splicing. Insertion of the BmHSP70 TSM into the single intron of the BmRBP1 gene did not render it trans-splicing competent. However, tagged constructs of the full-length BmRBP1 gene were trans-splicing competent. An analysis of the first exons and introns of over 200 trans-spliced B. malayi genes found homologues for the BmHSP70 TSM in roughly 25%. Thus, while the BmHSP70 TSM is necessary and sufficient to direct trans-splicing in some genomic contexts, independent trans-splicing signals are employed by other genes.
寄生线虫中的许多基因都进行顺式和反式剪接。先前的研究表明,马来丝虫70kDa热休克蛋白(BmHSP70)基因的第一个内含子中编码的一个7nt元件,对于用编码BmHSP70基因部分片段的构建体转染的胚胎中转基因mRNA的反式剪接是必需的。在此,我们证明该元件(马来丝虫HSP70反式剪接基序,或BmHSP70 TSM)对于指导源自两个天然含有该基序的基因的转基因mRNA的反式剪接是必需且充分的。引入到BmHSP70 TSM任何位置的突变都会消除其指导反式剪接的能力。用包含来自两个正常进行反式剪接但缺乏BmHSP70 TSM同源物的基因(马来丝虫12kDa小亚基核糖体蛋白(BmRPS12)基因和马来丝虫RNA结合蛋白(BmRBP1)基因)的启动子及相关下游结构域的构建体转染胚胎所产生的转基因mRNA,未发生反式剪接。将BmHSP70 TSM转移到BmRPS12基因的第一个内含子中使其具备反式剪接能力。将BmHSP70 TSM插入BmRBP1基因的单个内含子中并未使其具备反式剪接能力。然而,全长BmRBP1基因的标签构建体具有反式剪接能力。对200多个进行反式剪接的马来丝虫基因的第一个外显子和内含子进行分析发现,约25%的基因存在BmHSP70 TSM的同源物。因此,虽然BmHSP70 TSM在某些基因组背景下对于指导反式剪接是必需且充分的,但其他基因采用独立的反式剪接信号。