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有增强子和无增强子时酵母核糖体RNA基因启动子突变体的活性

Activity of promoter mutants of the yeast ribosomal RNA gene with and without the enhancer.

作者信息

Butlin M, Quincey R

机构信息

School of Biochemistry, University of Birmingham, Edgbaston, U.K.

出版信息

Yeast. 1991 Oct;7(7):679-89. doi: 10.1002/yea.320070703.

DOI:10.1002/yea.320070703
PMID:1776358
Abstract

The promoter and enhancer of the rRNA gene of Saccharomyces cerevisiae have been studied using a nuclease S1 protection assay to detect transcripts of an rRNA minigene in transformed yeast. Analysis of 5' deletion mutants showed that DNA between -163 bp and -155 bp was important for promoter activity and that some DNA between -155 bp and -145 bp was essential. The importance of DNA far upstream from the initiation site was confirmed by showing that minigene expression was much reduced by linker scanner mutations clustered around -148 bp, -133 bp and -100 bp, and was abolished by mutations clustered around -118 bp. The enhancer for rRNA biosynthesis increased transcription from all of the five mutated promoters that were tested. The magnitude of the enhancer effects on weakly active promoters was two- to three-fold less than on the wild-type promoter. Expression of a minor transcript in a 5' deletion to -10 bp was substantially reduced by a mutation which altered two base pairs in the core sequence of the promoter-proximal REB1 binding site.

摘要

利用核酸酶S1保护分析法检测转化酵母中rRNA小基因的转录本,对酿酒酵母rRNA基因的启动子和增强子进行了研究。对5'缺失突变体的分析表明,-163 bp至-155 bp之间的DNA对启动子活性很重要,-155 bp至-145 bp之间的一些DNA是必不可少的。通过显示小基因表达因聚集在-148 bp、-133 bp和-100 bp附近的接头扫描突变而大幅降低,并因聚集在-118 bp附近的突变而被消除,证实了起始位点上游很远的DNA的重要性。rRNA生物合成的增强子增加了所测试的五个突变启动子的转录。增强子对弱活性启动子的作用程度比对野生型启动子小两到三倍。一个5'缺失至-10 bp的次要转录本的表达因一个突变而大幅降低,该突变改变了启动子近端REB1结合位点核心序列中的两个碱基对。

相似文献

1
Activity of promoter mutants of the yeast ribosomal RNA gene with and without the enhancer.有增强子和无增强子时酵母核糖体RNA基因启动子突变体的活性
Yeast. 1991 Oct;7(7):679-89. doi: 10.1002/yea.320070703.
2
Expression of GCR1, the transcriptional activator of glycolytic enzyme genes in the yeast Saccharomyces cerevisiae, is positively autoregulated by Gcr1p.在酿酒酵母中,糖酵解酶基因的转录激活因子GCR1的表达受Gcr1p正向自调控。
Yeast. 2005 Mar;22(4):305-19. doi: 10.1002/yea.1212.
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Expression of the INO2 regulatory gene of Saccharomyces cerevisiae is controlled by positive and negative promoter elements and an upstream open reading frame.酿酒酵母INO2调控基因的表达受正、负启动子元件及一个上游开放阅读框的控制。
Mol Microbiol. 2001 Mar;39(5):1395-405.
4
Upstream activation of ribosomal RNA biosynthesis in Saccharomyces cerevisiae.酿酒酵母中核糖体RNA生物合成的上游激活
Biochem J. 1985 Nov 15;232(1):205-9. doi: 10.1042/bj2320205.
5
Expression of yeast 5S RNA is independent of the rDNA enhancer region.酵母5S RNA的表达独立于核糖体DNA增强子区域。
Nucleic Acids Res. 1990 Jul 25;18(14):4179-84. doi: 10.1093/nar/18.14.4179.
6
Binding sites for abundant nuclear factors modulate RNA polymerase I-dependent enhancer function in Saccharomyces cerevisiae.丰富核因子的结合位点调节酿酒酵母中RNA聚合酶I依赖的增强子功能。
J Biol Chem. 1995 Dec 1;270(48):28723-32. doi: 10.1074/jbc.270.48.28723.
7
Transcription of a yeast ribosomal RNA minigene in Saccharomyces cerevisiae.酿酒酵母中酵母核糖体RNA小基因的转录
Biochem J. 1984 Dec 1;224(2):497-503. doi: 10.1042/bj2240497.
8
A yeast ribosomal DNA-binding protein that binds to the rDNA enhancer and also close to the site of Pol I transcription initiation is not important for enhancer functioning.一种与核糖体DNA(rDNA)增强子结合且也靠近RNA聚合酶I转录起始位点的酵母核糖体DNA结合蛋白,对增强子功能并不重要。
Curr Genet. 1989 Dec;16(5-6):351-9. doi: 10.1007/BF00340714.
9
DNA protein-interactions at the Saccharomyces cerevisiae 35 S rRNA promoter and in its surrounding region.酿酒酵母35S rRNA启动子及其周边区域的DNA与蛋白质相互作用。
J Mol Biol. 1998 Jan 16;275(2):197-209. doi: 10.1006/jmbi.1997.1451.
10
The yeast rRNA gene enhancer does not function by recycling RNA polymerase I and cannot act as a UAS.酵母核糖体RNA基因增强子并非通过循环利用RNA聚合酶I发挥作用,且不能作为上游激活序列。
Curr Genet. 1991 Jul;20(1-2):9-16. doi: 10.1007/BF00312759.

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EMBO J. 2006 Feb 22;25(4):857-67. doi: 10.1038/sj.emboj.7600976. Epub 2006 Feb 9.
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Positive and negative autoregulation of REB1 transcription in Saccharomyces cerevisiae.酿酒酵母中REB1转录的正负自调控
Mol Cell Biol. 1998 Jul;18(7):4368-76. doi: 10.1128/MCB.18.7.4368.
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The yeast alpha 2 protein can repress transcription by RNA polymerases I and II but not III.酵母α2蛋白可抑制RNA聚合酶I和II的转录,但不抑制RNA聚合酶III的转录。
Mol Cell Biol. 1993 Jul;13(7):4029-38. doi: 10.1128/mcb.13.7.4029-4038.1993.