Geyer Tihamér
Zentrum für Bioinformatik, Universität des Saarlandes, Saarbrücken, Germany.
Biophys J. 2007 Dec 15;93(12):4374-81. doi: 10.1529/biophysj.107.106377. Epub 2007 Aug 31.
Some species of purple bacteria as, e.g., Rhodobacter sphaeroides contain the protein PufX. Concurrently, the light harvesting complexes 1 (LH1) form dimers of open rings. In mutants without PufX, the LH1s are closed rings and photosynthesis breaks down, because the ubiquinone exchange at the reaction center is blocked. However, the main purpose of the LH1 is light harvesting. We therefore investigate the effects that the PufX-induced dimerization has on the absorption properties of the core complexes. Calculations with a dipole model, which compare the photosynthetic efficiency of various configurations of monomeric and dimeric core complexes, show that the dimer can absorb photons directly into the reaction centers more efficiently, but that the performance of the more sophisticated dimeric LH1 antenna degrades faster with structural perturbations. The calculations predict an optimal orientation of the reaction centers relative to the LH1 dimer, which agrees well with the experimentally found configuration. Based on experimental observations indicating that the dimeric core complexes are indeed rather rigid, we hypothesize that in PufX(+) species the association between the LH1 and the reaction centers is enhanced. This mechanical stabilization of the core complexes would lead to the observed quinone blockage, when PufX is missing.
某些紫色细菌物种,例如球形红杆菌,含有蛋白质PufX。同时,光捕获复合物1(LH1)形成开环二聚体。在没有PufX的突变体中,LH1是闭环结构,光合作用会受到破坏,因为反应中心的泛醌交换被阻断。然而,LH1的主要功能是光捕获。因此,我们研究了PufX诱导的二聚化对核心复合物吸收特性的影响。使用偶极子模型进行的计算比较了单体和二聚体核心复合物各种构型的光合效率,结果表明二聚体能够更有效地将光子直接吸收到反应中心,但更复杂的二聚体LH1天线的性能会随着结构扰动而更快地下降。计算预测了反应中心相对于LH1二聚体的最佳取向,这与实验发现的构型非常吻合。基于实验观察表明二聚体核心复合物确实相当刚性,我们推测在有PufX的物种中,LH1与反应中心之间的结合会增强。当缺少PufX时,核心复合物的这种机械稳定作用会导致观察到的醌阻断现象。