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2
Possible pathway for ubiquinone shuttling in Rhodospirillum rubrum revealed by molecular dynamics simulation.分子动力学模拟揭示的红螺菌中泛醌穿梭的可能途径。
Biophys J. 2007 Jan 1;92(1):23-33. doi: 10.1529/biophysj.106.084715. Epub 2006 Oct 6.
3
Reconstruction of a kinetic model of the chromatophore vesicles from Rhodobacter sphaeroides.球形红细菌中嗜盐菌囊泡动力学模型的重建。
Biophys J. 2006 Aug 1;91(3):927-37. doi: 10.1529/biophysj.105.067561. Epub 2006 May 19.
4
A spatial model of the chromatophore vesicles of Rhodobacter sphaeroides and the position of the Cytochrome bc1 complex.球形红细菌的色素小泡空间模型及细胞色素bc1复合体的位置
Biophys J. 2006 Aug 1;91(3):921-6. doi: 10.1529/biophysj.105.078501. Epub 2006 May 19.
5
Calculation of absorption spectra for light-harvesting systems using non-Markovian approaches as well as modified Redfield theory.使用非马尔可夫方法以及修正的雷德菲尔德理论计算光收集系统的吸收光谱。
J Chem Phys. 2006 Feb 28;124(8):084903. doi: 10.1063/1.2171188.
6
The 8.5A projection structure of the core RC-LH1-PufX dimer of Rhodobacter sphaeroides.球形红细菌核心RC-LH1-PufX二聚体的8.5A投影结构。
J Mol Biol. 2005 Jun 24;349(5):948-60. doi: 10.1016/j.jmb.2005.04.032.
7
The long-range organization of a native photosynthetic membrane.天然光合膜的长程结构
Proc Natl Acad Sci U S A. 2004 Dec 28;101(52):17994-9. doi: 10.1073/pnas.0407295102. Epub 2004 Dec 15.
8
Structure of the dimeric PufX-containing core complex of Rhodobacter blasticus by in situ atomic force microscopy.通过原位原子力显微镜观察的 Blastobacter 红细菌含二聚体 PufX 的核心复合物结构。
J Biol Chem. 2005 Jan 14;280(2):1426-31. doi: 10.1074/jbc.M411334200. Epub 2004 Nov 1.
9
Variable LH2 stoichiometry and core clustering in native membranes of Rhodospirillum photometricum.光合红螺菌天然膜中可变的LH2化学计量与核心聚集
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10
The native architecture of a photosynthetic membrane.光合膜的天然结构。
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关于PufX对球形红杆菌捕光复合物吸收特性的影响

On the effects of PufX on the absorption properties of the light-harvesting complexes of Rhodobacter sphaeroides.

作者信息

Geyer Tihamér

机构信息

Zentrum für Bioinformatik, Universität des Saarlandes, Saarbrücken, Germany.

出版信息

Biophys J. 2007 Dec 15;93(12):4374-81. doi: 10.1529/biophysj.107.106377. Epub 2007 Aug 31.

DOI:10.1529/biophysj.107.106377
PMID:17766331
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2098715/
Abstract

Some species of purple bacteria as, e.g., Rhodobacter sphaeroides contain the protein PufX. Concurrently, the light harvesting complexes 1 (LH1) form dimers of open rings. In mutants without PufX, the LH1s are closed rings and photosynthesis breaks down, because the ubiquinone exchange at the reaction center is blocked. However, the main purpose of the LH1 is light harvesting. We therefore investigate the effects that the PufX-induced dimerization has on the absorption properties of the core complexes. Calculations with a dipole model, which compare the photosynthetic efficiency of various configurations of monomeric and dimeric core complexes, show that the dimer can absorb photons directly into the reaction centers more efficiently, but that the performance of the more sophisticated dimeric LH1 antenna degrades faster with structural perturbations. The calculations predict an optimal orientation of the reaction centers relative to the LH1 dimer, which agrees well with the experimentally found configuration. Based on experimental observations indicating that the dimeric core complexes are indeed rather rigid, we hypothesize that in PufX(+) species the association between the LH1 and the reaction centers is enhanced. This mechanical stabilization of the core complexes would lead to the observed quinone blockage, when PufX is missing.

摘要

某些紫色细菌物种,例如球形红杆菌,含有蛋白质PufX。同时,光捕获复合物1(LH1)形成开环二聚体。在没有PufX的突变体中,LH1是闭环结构,光合作用会受到破坏,因为反应中心的泛醌交换被阻断。然而,LH1的主要功能是光捕获。因此,我们研究了PufX诱导的二聚化对核心复合物吸收特性的影响。使用偶极子模型进行的计算比较了单体和二聚体核心复合物各种构型的光合效率,结果表明二聚体能够更有效地将光子直接吸收到反应中心,但更复杂的二聚体LH1天线的性能会随着结构扰动而更快地下降。计算预测了反应中心相对于LH1二聚体的最佳取向,这与实验发现的构型非常吻合。基于实验观察表明二聚体核心复合物确实相当刚性,我们推测在有PufX的物种中,LH1与反应中心之间的结合会增强。当缺少PufX时,核心复合物的这种机械稳定作用会导致观察到的醌阻断现象。