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巴拿马巴罗科罗拉多岛豆科植物与根瘤菌的共生关系:综述

Symbiotic relationships of legumes and nodule bacteria on Barro Colorado Island, Panama: a review.

作者信息

Parker Matthew A

机构信息

Department of Biological Sciences, State University of New York, Binghamton, NY 13902, USA.

出版信息

Microb Ecol. 2008 May;55(4):662-72. doi: 10.1007/s00248-007-9309-z.

Abstract

Abstract New data on 129 bacterial isolates were analyzed together with prior samples to characterize community-level patterns of legume-rhizobial symbiosis on Barro Colorado Island (BCI), Panama. Nodules have been sampled from 24 BCI legume species in 18 genera, representing about one quarter of the legume species and one half of the genera on the island. Most BCI legumes associated exclusively with nodule symbionts in the genus Bradyrhizobium, which comprised 86.3% of all isolates (315 of 365). Most of the remaining isolates (44 of 365) belonged to the beta-proteobacterial genus Burkholderia; these were restricted to two genera in the legume subfamily Mimosoideae. Multilocus sequence analysis indicated that BCI Bradyrhizobium strains were differentiated into at least eight lineages with deoxyribonucleic acid divergence of the same magnitude as found among currently recognized species in this bacterial genus. Two of these lineages were widely distributed across BCI legumes. One lineage was utilized by 15 host species of diverse life form (herbs, lianas, and trees) in 12 genera spanning two legume subfamilies. A second common lineage closely related to the taxon B. elkanii was associated with at least five legume genera in four separate tribes. Thus, BCI legume species from diverse clades within the family frequently share interaction with a few common lineages of nodule symbionts. However, certain host species were associated with unique symbiont lineages that have not been found on other coexisting BCI legumes. More comprehensive sampling of host taxa will be needed to characterize the overall diversity of nodule bacteria and the patterns of symbiont sharing among legumes in this community.

摘要

摘要 对129株细菌分离株的新数据与先前的样本进行了分析,以表征巴拿马巴罗科罗拉多岛(BCI)上豆科植物 - 根瘤菌共生的群落水平模式。已从18个属的24种BCI豆科植物中采集了根瘤样本,这些植物约占该岛豆科植物物种的四分之一和属的一半。大多数BCI豆科植物仅与慢生根瘤菌属中的根瘤共生体相关联,该属占所有分离株的86.3%(365株中的315株)。其余大多数分离株(365株中的44株)属于β-变形菌属伯克霍尔德菌属;这些分离株仅限于豆科含羞草亚科的两个属。多位点序列分析表明,BCI慢生根瘤菌菌株至少分化为八个谱系,其脱氧核糖核酸差异程度与该细菌属中目前公认的物种之间的差异程度相同。其中两个谱系广泛分布于BCI豆科植物中。一个谱系被两个豆科亚科的12个属中的15种不同生活形式(草本植物、藤本植物和树木)的宿主物种所利用。与埃尔卡尼慢生根瘤菌分类单元密切相关的第二个常见谱系与四个不同部落中的至少五个豆科属相关联。因此,该科内不同进化枝的BCI豆科植物物种经常与少数几个常见的根瘤共生体谱系相互作用。然而,某些宿主物种与在其他共存的BCI豆科植物上未发现的独特共生体谱系相关联。需要对宿主分类群进行更全面的采样,以表征根瘤细菌的总体多样性以及该群落中豆科植物之间共生体共享的模式。

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