Bobrovnik S A
Department of Molecular Immunology, Palladin Institute of Biochemistry, Kiev 01601, Ukraine.
J Mol Recognit. 2007 Jul-Aug;20(4):253-62. doi: 10.1002/jmr.836.
Bivalent or polyvalent cooperative binding between ligand and receptor is much tighter and more efficient than monovalent binding of the same counterparts. Because of this, many biological processes involve polyvalent binding for realization of regulatory mechanisms. For this reason it is necessary to develop a general formalism for prediction of the relationship between the binding affinities of each ligand subunits, the length of the flexible linker between them and avidity of the interaction. Here, we consider an approach that is based on the description of the state of equilibrium for the reaction of mono- and multivalent ligand-receptor binding of algebraic equation systems. This approach allows the evaluation of the avidity of bivalent binding and to determine the concentrations of ligand-receptor complexes, which will be obtained at the equilibrium state. The analysis presented here may be useful in analysing the binding behaviour of a bivalent receptor and a ligand consisting of two subunits covalently connected with a rigid or flexible linker.
配体与受体之间的二价或多价协同结合比相同对应物的单价结合紧密得多且效率更高。因此,许多生物过程都涉及多价结合以实现调节机制。出于这个原因,有必要开发一种通用形式来预测每个配体亚基的结合亲和力、它们之间柔性连接子的长度与相互作用亲和力之间的关系。在这里,我们考虑一种基于代数方程组的单价和多价配体 - 受体结合反应平衡状态描述的方法。这种方法允许评估二价结合的亲和力,并确定在平衡状态下将获得的配体 - 受体复合物的浓度。这里提出的分析可能有助于分析由刚性或柔性连接子共价连接的两个亚基组成的二价受体和配体的结合行为。