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ADAM33,银屑病易感性的一个新候选基因。

ADAM33, a new candidate for psoriasis susceptibility.

机构信息

Centre National de Génotypage, Evry, France.

出版信息

PLoS One. 2007 Sep 19;2(9):e906. doi: 10.1371/journal.pone.0000906.

DOI:10.1371/journal.pone.0000906
PMID:17878941
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1975467/
Abstract

Psoriasis is a chronic skin disorder with multifactorial etiology. In a recent study, we reported results of a genome-wide scan on 46 French extended families presenting with plaque psoriasis. In addition to unambiguous linkage to the major susceptibility locus PSORS1 on Chromosome 6p21, we provided evidence for a susceptibility locus on Chromosome 20p13. To follow up this novel psoriasis susceptibility locus we used a family-based association test (FBAT) for an association scan over the 17 Mb candidate region. A total of 85 uncorrelated SNP markers located in 65 genes of the region were initially investigated in the same set of large families used for the genome wide search, which consisted of 295 nuclear families. When positive association was obtained for a SNP, candidate genes nearby were explored more in detail using a denser set of SNPs. Thus, the gene ADAM33 was found to be significantly associated with psoriasis in this family set (The best association was on a 3-SNP haplotype P = 0.00004, based on 1,000,000 permutations). This association was independent of PSORS1. ADAM33 has been previously associated with asthma, which demonstrates that immune system diseases may be controlled by common susceptibility genes with general effects on dermal inflammation and immunity. The identification of ADAM33 as a psoriasis susceptibility gene identified by positional cloning in an outbred population should provide insights into the pathogenesis and natural history of this common disease.

摘要

银屑病是一种具有多种病因的慢性皮肤疾病。在最近的一项研究中,我们报告了对 46 个具有斑块状银屑病的法国家族进行全基因组扫描的结果。除了明确与 6 号染色体 p21 上的主要易感基因 PSORS1 连锁外,我们还提供了 20 号染色体 p13 上存在易感基因的证据。为了进一步研究这个新的银屑病易感基因,我们使用基于家系的关联测试(FBAT)对 17 Mb 的候选区域进行了关联扫描。在最初的研究中,我们在同一组大型家族中使用了 85 个不相关的 SNP 标记,这些 SNP 标记位于该区域的 65 个基因中,这些家族用于全基因组搜索,共包含 295 个核心家庭。当在一个 SNP 上获得阳性关联时,我们使用更密集的 SNP 集来更详细地探索附近的候选基因。因此,在这个家族中,发现 ADAM33 基因与银屑病显著相关(最佳关联是在一个包含 3 个 SNP 的单倍型上,P = 0.00004,基于 100 万次随机排列)。这种关联与 PSORS1 无关。ADAM33 先前与哮喘有关,这表明免疫系统疾病可能受普遍影响皮肤炎症和免疫的共同易感基因控制。在一个异质人群中通过定位克隆确定 ADAM33 作为银屑病易感基因,应该可以深入了解这种常见疾病的发病机制和自然史。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e32b/1975467/161dc42b566c/pone.0000906.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e32b/1975467/161dc42b566c/pone.0000906.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e32b/1975467/161dc42b566c/pone.0000906.g001.jpg

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Discovering Genetic Factors for psoriasis through exhaustively searching for significant second order SNP-SNP interactions.通过穷尽搜索显著的二阶 SNP-SNP 相互作用来发现银屑病的遗传因素。
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本文引用的文献

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Public data mining shows extended linkage disequilibrium around ADAM33.公共数据挖掘显示,ADAM33基因周围存在扩展的连锁不平衡。
Allergy. 2007 Apr;62(4):444-6. doi: 10.1111/j.1398-9995.2006.01298.x.
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Confirmation of psoriasis susceptibility loci on chromosome 6p21 and 20p13 in French families.法国人群体中6号染色体p21区域和20号染色体p13区域银屑病易感基因座的确认
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Genetics of spondyloarthritis--beyond the MHC.脊柱关节炎的遗传学研究——超越 MHC 之外。
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The Roles of ADAMs Family Proteinases in Skin Diseases.ADAMs家族蛋白酶在皮肤病中的作用。
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[Genetics of common chronic inflammatory skin diseases : An update on atopic dermatitis and psoriasis].[常见慢性炎症性皮肤病的遗传学:特应性皮炎和银屑病的最新进展]
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The susceptibility loci juvenile idiopathic arthritis shares with other autoimmune diseases extend to PTPN2, COG6, and ANGPT1.幼年特发性关节炎与其他自身免疫性疾病共有的易感基因座延伸至蛋白酪氨酸磷酸酶非受体型2(PTPN2)、保守寡聚高尔基复合体蛋白6(COG6)和血管生成素1(ANGPT1)。
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Carriers of rare missense variants in IFIH1 are protected from psoriasis.携带 IFIH1 罕见错义变异的个体可免受银屑病的影响。
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Sequence and haplotype analysis supports HLA-C as the psoriasis susceptibility 1 gene.序列和单倍型分析支持HLA - C作为银屑病1型易感基因。
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