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温度诱导的基因表达与生长速率的不同热反应规范相关。

Temperature-induced gene expression associated with different thermal reaction norms for growth rate.

作者信息

Ellers Jacintha, Mariën Janine, Driessen Gerard, van Straalen Nico M

机构信息

Department of Animal Ecology, Institute of Ecological Science, Vrije Universiteit, Amsterdam, The Netherlands.

出版信息

J Exp Zool B Mol Dev Evol. 2008 Mar 15;310(2):137-47. doi: 10.1002/jez.b.21194.

Abstract

Although nearly all organisms are subject to fluctuating temperature regimes in their natural habitat, little is known about the genetics underlying the response to thermal conditions, and even less about the genetic differences that cause individual variation in thermal response. Here, we aim to elucidate possible pathways involved in temperature-induced phenotypic plasticity of growth rate. Our model organism is the collembolan Orchesella cincta that occurs in a wide variety of habitats and is known to be adapted to local thermal conditions. Because sequence information is lacking in O. cincta, we constructed cDNA libraries enriched for temperature-responsive genes using suppression subtractive hybridization. We compared gene expression of O. cincta with steep thermal reaction norms (high plasticity) to those with flat thermal reaction norms (low plasticity) for juvenile growth after exposure to a temperature switch composed of a cooling or a warming treatment. Using suppression subtractive hybridization, we found differential expression of ten nuclear genes, including several genes involved in energy metabolism, such as pantothenate kinase and carbonic anhydrase. In addition, seven mitochondrial genes were found in the cloned subtracted library, but further analysis showed this was caused by allelic variation in mitochondrial genes in our founder population, and that a specific haplotype was associated with high thermal responsiveness. Future work will focus on candidate genes from pathways such as the oxidative phosphorylation and biosynthesis of coenzyme A which are possibly involved in thermal responsiveness of juvenile growth rate.

摘要

尽管几乎所有生物在其自然栖息地都会受到温度波动的影响,但对于热条件响应背后的遗传学知之甚少,对于导致热响应个体差异的遗传差异了解更少。在这里,我们旨在阐明参与温度诱导的生长速率表型可塑性的可能途径。我们的模式生物是弹尾虫环带奥氏跳虫,它存在于多种栖息地,并且已知适应当地的热条件。由于环带奥氏跳虫缺乏序列信息,我们使用抑制性消减杂交构建了富含温度响应基因的cDNA文库。在暴露于由冷却或升温处理组成的温度转换后,我们比较了具有陡峭热反应规范(高可塑性)的环带奥氏跳虫与具有平坦热反应规范(低可塑性)的环带奥氏跳虫在幼体生长方面的基因表达。通过抑制性消减杂交,我们发现了十个核基因的差异表达,包括几个参与能量代谢的基因,如泛酸激酶和碳酸酐酶。此外,在克隆的消减文库中发现了七个线粒体基因,但进一步分析表明,这是由我们创始群体中线粒体基因的等位基因变异引起的,并且特定单倍型与高热响应性相关。未来的工作将集中在氧化磷酸化和辅酶A生物合成等途径中的候选基因上,这些基因可能参与幼体生长速率的热响应。

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