Tyra Heather M, Linka Marc, Weber Andreas P M, Bhattacharya Debashish
Department of Biological Sciences and Roy J Carver Center for Comparative Genomics, 446 Biology Building, University of Iowa, Iowa City, IA 52242-1324, USA.
Genome Biol. 2007;8(10):R212. doi: 10.1186/gb-2007-8-10-r212.
It is generally accepted that a single primary endosymbiosis in the Plantae (red, green (including land plants), and glaucophyte algae) common ancestor gave rise to the ancestral photosynthetic organelle (plastid). Plastid establishment necessitated many steps, including the transfer and activation of endosymbiont genes that were relocated to the nuclear genome of the 'host' followed by import of the encoded proteins into the organelle. These innovations are, however, highly complex and could not have driven the initial formation of the endosymbiosis. We postulate that the re-targeting of existing host solute transporters to the plastid fore-runner was critical for the early success of the primary endosymbiosis, allowing the host to harvest endosymbiont primary production.
We tested this model of transporter evolution by conducting a comprehensive analysis of the plastid permeome in Arabidopsis thaliana. Of 137 well-annotated transporter proteins that were initially considered, 83 that are broadly distributed in Plantae were submitted to phylogenetic analysis. Consistent with our hypothesis, we find that 58% of Arabidopsis transporters, including all carbohydrate transporters, are of host origin, whereas only 12% arose from the cyanobacterial endosymbiont. Four transporter genes are derived from a Chlamydia-like source, suggesting that establishment of the primary plastid likely involved contributions from at least two prokaryotic sources.
Our results indicate that the existing plastid solute transport system shared by Plantae is derived primarily from host genes. Important contributions also came from the cyanobacterial endosymbiont and Chlamydia-like bacteria likely co-resident in the first algae.
人们普遍认为,植物界(红藻、绿藻(包括陆地植物)和灰胞藻)的共同祖先中发生的一次主要内共生事件产生了原始的光合细胞器(质体)。质体的建立需要许多步骤,包括内共生体基因的转移和激活,这些基因被转移到“宿主”的核基因组中,随后将编码的蛋白质导入细胞器。然而,这些创新非常复杂,不可能推动内共生的最初形成。我们推测,将现有的宿主溶质转运蛋白重新定位到质体前体对于主要内共生的早期成功至关重要,这使得宿主能够获取内共生体的初级产物。
我们通过对拟南芥的质体通透组进行全面分析,测试了这种转运蛋白进化模型。在最初考虑的137个注释良好的转运蛋白中,83个广泛分布于植物界的蛋白被用于系统发育分析。与我们的假设一致,我们发现拟南芥中58%的转运蛋白,包括所有碳水化合物转运蛋白,都起源于宿主,而只有12%来自蓝细菌内共生体。四个转运蛋白基因来自类似衣原体的来源,这表明原始质体的建立可能涉及至少两个原核生物来源的贡献。
我们的结果表明,植物界共有的现有质体溶质运输系统主要来源于宿主基因。重要贡献也来自蓝细菌内共生体和可能共同存在于最早藻类中的类似衣原体的细菌。