Zhong Ligang, Bamm Vladimir V, Ahmed Mumdooh A M, Harauz George, Ladizhansky Vladimir
Department of Physics, University of Guelph, 50 Stone Road East, Guelph, Ontario, Canada N1G 2W1.
Biochim Biophys Acta. 2007 Dec;1768(12):3193-205. doi: 10.1016/j.bbamem.2007.08.013. Epub 2007 Aug 24.
Myelin basic protein (MBP, 18.5 kDa isoform) is a peripheral membrane protein that is essential for maintaining the structural integrity of the multilamellar myelin sheath of the central nervous system. Reconstitution of the most abundant 18.5 kDa MBP isoform with lipid vesicles yields an aggregated assembly mimicking the protein's natural environment, but which is not amenable to standard solution NMR spectroscopy. On the other hand, the mobility of MBP in such a system is variable, depends on the local strength of the protein-lipid interaction, and in general is of such a time scale that the dipolar interactions are averaged out. Here, we used a combination of solution and solid-state NMR (ssNMR) approaches: J-coupling-driven polarization transfers were combined with magic angle spinning and high-power decoupling to yield high-resolution spectra of the mobile fragments of 18.5 kDa murine MBP in membrane-associated form. To partially circumvent the problem of short transverse relaxation, we implemented three-dimensional constant-time correlation experiments (NCOCX, NCACX, CONCACX, and CAN(CO)CX) that were able to provide interresidue and intraresidue backbone correlations. These experiments resulted in partial spectral assignments for mobile fragments of the protein. Additional nuclear Overhauser effect spectroscopy (NOESY)-based experiments revealed that the mobile fragments were exposed to solvent and were likely located outside the lipid bilayer, or in its hydrophilic portion. Chemical shift index analysis showed that the fragments were largely disordered under these conditions. These combined approaches are applicable to ssNMR investigations of other peripheral membrane proteins reconstituted with lipids.
髓鞘碱性蛋白(MBP,18.5 kDa异构体)是一种外周膜蛋白,对于维持中枢神经系统多层髓鞘的结构完整性至关重要。用脂质囊泡重构最丰富的18.5 kDa MBP异构体可产生一种聚集组装体,模拟该蛋白的天然环境,但不适用于标准溶液核磁共振光谱。另一方面,MBP在这样一个系统中的流动性是可变的,取决于蛋白质-脂质相互作用的局部强度,并且一般来说其时间尺度使得偶极相互作用被平均掉。在这里,我们使用了溶液核磁共振和固态核磁共振(ssNMR)方法的组合:J耦合驱动的极化转移与魔角旋转和高功率去耦相结合,以产生膜相关形式的18.5 kDa小鼠MBP移动片段的高分辨率光谱。为了部分规避横向弛豫时间短的问题,我们实施了三维恒时相关实验(NCOCX、NCACX、CONCACX和CAN(CO)CX),这些实验能够提供残基间和残基内的主链相关性。这些实验导致了该蛋白移动片段的部分光谱归属。基于核Overhauser效应光谱(NOESY)的额外实验表明,移动片段暴露于溶剂中,可能位于脂质双层之外或其亲水部分。化学位移指数分析表明,在这些条件下这些片段大多是无序的。这些组合方法适用于对用脂质重构的其他外周膜蛋白进行ssNMR研究。