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从玫瑰茄发酵种子比卡尔加中鉴定芽孢杆菌属:表型和基因型特征分析。

Identification of Bacillus spp. from Bikalga, fermented seeds of Hibiscus sabdariffa: phenotypic and genotypic characterization.

作者信息

Ouoba L I I, Parkouda C, Diawara B, Scotti C, Varnam A H

机构信息

Microbiology Research Unit, Department of Health and Human Sciences, London Metropolitan University, London, UK.

出版信息

J Appl Microbiol. 2008 Jan;104(1):122-31. doi: 10.1111/j.1365-2672.2007.03550.x. Epub 2007 Oct 8.

Abstract

AIMS

To identify Bacillus spp. responsible of the fermentation of Hibiscus sabdariffa for production of Bikalga, an alkaline fermented food used as a condiment in Burkina Faso.

METHODS AND RESULTS

Seventy bacteria were isolated from Bikalga produced in different regions of Burkina Faso and identified by phenotyping and genotyping using PCR amplification of the 16S-23S rDNA intergenic transcribed spacer (ITS-PCR), repetitive sequence-based PCR (rep-PCR) and DNA sequencing. The isolates were characterized as motile, rod-shaped, endospore forming, catalase positive, Gram-positive bacteria. ITS-PCR allowed typing mainly at species level. Rep-PCR was more discriminative and allowed a typing at ssp. level. The DNA sequencing combined with the Blast search program and fermentation profiles using API 50CHB system allowed an identification of the bacteria as Bacillus subtilis, B. licheniformis, B. cereus, B. pumilus, B. badius, Brevibacillus bortelensis, B. sphaericus and B. fusiformis. B. subtilis were the predominant bacterium (42) followed by B. licheniformis (16).

CONCLUSIONS

Various species and ssp. of Bacillus are involved in fermentation of H. sabdariffa for production of Bikalga.

SIGNIFICANCE AND IMPACT OF THE STUDY

Selection of starter cultures of Bacillus for controlled production of Bikalga, selection of probiotic bacteria.

摘要

目的

鉴定负责发酵玫瑰茄以生产比卡尔加的芽孢杆菌属细菌,比卡尔加是布基纳法索用作调味品的一种碱性发酵食品。

方法与结果

从布基纳法索不同地区生产的比卡尔加中分离出70株细菌,并通过表型分析和基因分型进行鉴定,基因分型采用16S - 23S rDNA基因间隔转录区的PCR扩增(ITS - PCR)、基于重复序列的PCR(rep - PCR)和DNA测序。分离出的菌株被鉴定为运动性、杆状、产芽孢、过氧化氢酶阳性的革兰氏阳性菌。ITS - PCR主要能在种水平上进行分型。Rep - PCR的鉴别力更强,能在亚种水平上进行分型。结合Blast搜索程序的DNA测序以及使用API 50CHB系统的发酵谱分析,可将这些细菌鉴定为枯草芽孢杆菌、地衣芽孢杆菌、蜡样芽孢杆菌、短小芽孢杆菌、短芽孢杆菌、博特尔短芽孢杆菌、球形芽孢杆菌和梭形芽孢杆菌。枯草芽孢杆菌是主要的细菌(42株),其次是地衣芽孢杆菌(16株)。

结论

多种芽孢杆菌属的种和亚种参与了玫瑰茄发酵生产比卡尔加的过程。

研究的意义和影响

选择芽孢杆菌作为发酵剂用于比卡尔加的可控生产,选择益生菌。

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