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锌(II)与氨基酸模型及肽片段相互作用的理论研究

A theoretical study of zinc(II) interactions with amino acid models and peptide fragments.

作者信息

Trzaskowski Bartosz, Adamowicz Ludwik, Deymier Pierre A

机构信息

Department of Chemistry, University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721, USA.

出版信息

J Biol Inorg Chem. 2008 Jan;13(1):133-7. doi: 10.1007/s00775-007-0306-y. Epub 2007 Oct 9.

Abstract

Density functional theory calculations have been employed to study the interaction between the Zn2+ ion and some standard amino acid models. The highest affinities towards the Zn2+ ion are predicted for serine, cysteine, and histidine. Relatively high affinities are reported also for proline and glutamate/aspartate residues. It was found that the zinc complexes with cysteine adopt a tetrahedral conformation. Conversely, complexes with one or two histidine moieties remain in an octahedral geometry, while those with three or more histidine groups adopt a square-planar geometry.

摘要

已采用密度泛函理论计算来研究Zn2+离子与一些标准氨基酸模型之间的相互作用。预测丝氨酸、半胱氨酸和组氨酸对Zn2+离子具有最高亲和力。脯氨酸以及谷氨酸/天冬氨酸残基也具有相对较高的亲和力。研究发现,与半胱氨酸形成的锌配合物呈四面体构象。相反,含有一个或两个组氨酸部分的配合物保持八面体几何形状,而含有三个或更多组氨酸基团的配合物则呈平面正方形几何形状。

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