Tada Hiroshi, Nishimura Yuko, Suzuki Tomohiko
Laboratory of Biochemistry, Faculty of Science, Kochi University, Kochi 780-8520 Japan.
Int J Biol Macromol. 2008 Jan 1;42(1):46-51. doi: 10.1016/j.ijbiomac.2007.09.004. Epub 2007 Sep 15.
cDNAs of the two-domain arginine kinase (AK) (contiguous dimer; denoted by 2D/WT) and its separated domains 1 and 2 (denoted by D1/WT and D2/WT) from the sea anemone Anthopleura japonicus, were cloned into the plasmid pMAL, and recombinant enzymes were expressed in E. coli as MBP fusion proteins. The kinetic parameters kcat, Ka and Kia, were determined for all three AKs. All three enzymes showed distinct AK activity, and had high affinity for arginine (Ka Arg=0.25-0.48 mM). The catalytic efficiency, calculated by kcat/Ka ArgKia ATP, of the 2D/WT enzyme (182 mM(-2)s(-1), the value for one active 40 kDa domain) was two- to three-times higher than values for either D1/WT or D2/WT (80.2 and 86.4mM(-2)s(-1), respectively), suggesting the presence of domain-domain interactions (cooperativity) in the contiguous dimer. The Kia/Ka values of the three enzymes ranged from 0.88 to 1.32, indicating that there is no strong synergism in substrate binding, as seen in typical AKs. Asp62 and Arg193, which are conserved in most AKs and play a key role in stabilizing the substrate-bound structure, are also conserved in the two domains of Anthopleura AK. We replaced Asp62 in D2/WT with Glu or Gly. The catalytic efficiency and Kia/Ka for the D62E mutant were comparable to those of D2/WT, but catalytic efficiency for the D62G mutant was decreased to 13% of that of the D2/WT with a significantly increased value of Kia/Ka (1.92), indicating that Asp62 plays an important role in the expression of AK activity.
从日本海葵中克隆出两结构域精氨酸激酶(AK)(连续二聚体;记为2D/WT)及其分离的结构域1和2(记为D1/WT和D2/WT)的cDNA,将其克隆到质粒pMAL中,并在大肠杆菌中作为MBP融合蛋白表达重组酶。测定了所有三种AK的动力学参数kcat、Ka和Kia。所有三种酶均表现出明显的AK活性,并且对精氨酸具有高亲和力(Ka Arg = 0.25 - 0.48 mM)。通过kcat/Ka ArgKia ATP计算的2D/WT酶(182 mM(-2)s(-1),一个活性40 kDa结构域的值)的催化效率比D1/WT或D2/WT(分别为80.2和86.4 mM(-2)s(-1))的值高两到三倍,这表明连续二聚体中存在结构域 - 结构域相互作用(协同性)。三种酶的Kia/Ka值在0.88至1.32之间,表明在底物结合中不存在如典型AK中所见的强协同作用。在大多数AK中保守且在稳定底物结合结构中起关键作用的Asp62和Arg193,在海葵AK的两个结构域中也保守。我们将D2/WT中的Asp62替换为Glu或Gly。D62E突变体的催化效率和Kia/Ka与D2/WT相当,但D62G突变体的催化效率降至D2/WT的13%,且Kia/Ka值显著增加(1.92),表明Asp62在AK活性表达中起重要作用。