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磷酸肌酸激酶底物特异性中氨基酸残基95的作用。

Role of amino-acid residue 95 in substrate specificity of phosphagen kinases.

作者信息

Tanaka Kumiko, Suzuki Tomohiko

机构信息

Laboratory of Biochemistry, Faculty of Science, Kochi University, Kochi 780-8520, Japan.

出版信息

FEBS Lett. 2004 Aug 27;573(1-3):78-82. doi: 10.1016/j.febslet.2004.07.061.

Abstract

The purpose of this study is to elucidate the mechanisms of guanidine substrate specificity in phosphagen kinases, including creatine kinase (CK), glycocyamine kinase (GK), lombricine kinase (LK), taurocyamine kinase (TK) and arginine kinase (AK). Among these enzymes, LK is unique in that it shows considerable enzyme activity for taurocyamine in addition to its original target substrate, lombricine. We earlier proposed several candidate amino acids associated with guanidine substrate recognition. Here, we focus on amino-acid residue 95, which is strictly conserved in phosphagen kinases: Arg in CK, Ile in GK, Lys in LK and Tyr in AK. This residue is not directly associated with substrate binding in CK and AK crystal structures, but it is located close to the binding site of the guanidine substrate. We replaced amino acid 95 Lys in LK isolated from earthworm Eisenia foetida with two amino acids, Arg or Tyr, expressed the modified enzymes in Escherichia coli as a fusion protein with maltose-binding protein, and determined the kinetic parameters. The K95R mutant enzyme showed a stronger affinity for both lombricine (Km=0.74 mM and kcat/Km=19.34 s(-1) mM(-1)) and taurocyamine (Km=2.67 and kcat/Km=2.81), compared with those of the wild-type enzyme (Km=5.33 and kcat/Km=3.37 for lombricine, and Km=15.31 and kcat/ Km=0.48for taurocyamine). Enzyme activity of the other mutant, K95Y, was dramatically altered. The affinity for taurocyamine (Km=1.93 and kcat/Km=6.41) was enhanced remarkably and that for lombricine (Km=14.2 and kcat/Km=0.72) was largely decreased, indicating that this mutant functions as a taurocyamine kinase. This mutant also had a lower but significant enzyme activity for the substrate arginine (Km=33.28 and kcat/Km=0.01). These results suggest that Eisenia LK is an inherently flexible enzyme and that substrate specificity is strongly controlled by the amino-acid residue at position 95.

摘要

本研究的目的是阐明磷酸肌酸激酶中胍底物特异性的机制,这些激酶包括肌酸激酶(CK)、胍基乙胺激酶(GK)、蚯蚓肌酸激酶(LK)、牛磺酸肌酸激酶(TK)和精氨酸激酶(AK)。在这些酶中,LK的独特之处在于,除了其原始靶底物蚯蚓肌酸外,它对牛磺酸肌酸也表现出相当高的酶活性。我们之前提出了几个与胍底物识别相关的候选氨基酸。在这里,我们关注的是氨基酸残基95,它在磷酸肌酸激酶中严格保守:CK中的精氨酸、GK中的异亮氨酸、LK中的赖氨酸和AK中的酪氨酸。在CK和AK晶体结构中,该残基不直接与底物结合,但它位于胍底物结合位点附近。我们用精氨酸或酪氨酸这两种氨基酸替换了从蚯蚓 Eisenia foetida 中分离出的LK中的氨基酸95赖氨酸,将修饰后的酶在大肠杆菌中作为与麦芽糖结合蛋白的融合蛋白进行表达,并测定了动力学参数。与野生型酶相比,K95R突变酶对蚯蚓肌酸(Km = 0.74 mM,kcat/Km = 19.34 s(-1) mM(-1))和牛磺酸肌酸(Km = 2.67,kcat/Km = 2.81)都表现出更强的亲和力(野生型酶对蚯蚓肌酸的Km = 5.33,kcat/Km = 3.37;对牛磺酸肌酸的Km = 15.31,kcat/Km = 0.48)。另一个突变体K95Y的酶活性发生了显著改变。它对牛磺酸肌酸的亲和力(Km = 1.93,kcat/Km = 6.41)显著增强,而对蚯蚓肌酸的亲和力(Km = 14.2,kcat/Km = 0.72)大幅降低,这表明该突变体起牛磺酸肌酸激酶的作用。该突变体对底物精氨酸也有较低但显著的酶活性(Km = 33.28,kcat/Km = 0.01)。这些结果表明,蚯蚓LK是一种本质上具有灵活性的酶,底物特异性受到95位氨基酸残基的强烈控制。

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