• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

关于密度泛函理论(DFT)中临时阴离子计算里势垒的位置

On the position of the potential wall in DFT temporary anion calculations.

作者信息

Sablon Nick, De Proft Frank, Geerlings Paul, Tozer David J

机构信息

Eenheid Algemene Chemie (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050, Brussels, Belgium.

出版信息

Phys Chem Chem Phys. 2007 Nov 28;9(44):5880-4. doi: 10.1039/b711428a. Epub 2007 Sep 24.

DOI:10.1039/b711428a
PMID:17989795
Abstract

A simple method was recently proposed [D. J. Tozer and F. De Proft, J. Chem. Phys., 2007, 127, 034108] for performing explicit density functional theory (DFT) calculations on temporary anions. The excess electron in the anion is bound by a potential wall, the position of which is determined by a single parameter lambda, chosen to reproduce an approximate, theoretical negative electron affinity in the corresponding neutral. In the present study, the system-dependence of lambda and the sensitivity of the negative affinities to this parameter are investigated for 34 organic molecules. The results demonstrate that the system-dependent lambda values can be replaced by a global, average value, with minimal effect on the affinities. It follows that the orbitals, electron density, and other properties of a temporary anion can be determined from a single DFT calculation on that anion, using a large, diffuse basis set. As an illustration, singly occupied molecular orbitals and spin densities are determined for the anions of guanine and adenine nucleobases. Despite the use of a diffuse basis set, the method yields quantities that are localised in the molecular framework, associated with vertical electron affinities of -1.2 eV and -0.8 eV, respectively.

摘要

最近有人提出了一种简单的方法[D. J. 托泽尔和F. 德普罗夫特,《化学物理杂志》,2007年,第127卷,034108],用于对临时阴离子进行显式密度泛函理论(DFT)计算。阴离子中的多余电子被一个势垒束缚,势垒的位置由单个参数λ确定,该参数被选择用来重现相应中性分子中近似的理论负电子亲和能。在本研究中,针对34种有机分子研究了λ的系统依赖性以及负亲和能对该参数的敏感性。结果表明,与系统相关的λ值可以用一个全局平均值代替,而对亲和能的影响最小。由此可知,临时阴离子的轨道、电子密度和其他性质可以通过对该阴离子进行单次DFT计算来确定,使用大的弥散基组。作为一个示例,确定了鸟嘌呤和腺嘌呤核碱基阴离子的单占据分子轨道和自旋密度。尽管使用了弥散基组,但该方法得到的量在分子框架中是局域化的,分别对应垂直电子亲和能为-1.2 eV和-0.8 eV。

相似文献

1
On the position of the potential wall in DFT temporary anion calculations.关于密度泛函理论(DFT)中临时阴离子计算里势垒的位置
Phys Chem Chem Phys. 2007 Nov 28;9(44):5880-4. doi: 10.1039/b711428a. Epub 2007 Sep 24.
2
Modeling temporary anions in density functional theory: calculation of the Fukui function.密度泛函理论中临时阴离子的建模:福井函数的计算
J Chem Phys. 2007 Jul 21;127(3):034108. doi: 10.1063/1.2751158.
3
The negative ion states of molecules: adenine and guanine.分子的负离子态:腺嘌呤和鸟嘌呤。
Biochem Biophys Res Commun. 2001 Nov 30;289(2):421-6. doi: 10.1006/bbrc.2001.6005.
4
Species with negative electron affinity and standard DFT methods. Finding the valence anions.具有负电子亲和能的物种与标准密度泛函理论方法。寻找价态阴离子。
Phys Chem Chem Phys. 2008 Mar 14;10(10):1394-9. doi: 10.1039/b716625g. Epub 2008 Jan 28.
5
DNA nucleosides and their radical anions: molecular structures and electron affinities.DNA核苷及其自由基阴离子:分子结构与电子亲和势
J Am Chem Soc. 2004 Apr 7;126(13):4404-11. doi: 10.1021/ja030487m.
6
Successive attachment of electrons to protonated Guanine: (G+H)* radicals and (G+H)- anions.电子相继附着于质子化鸟嘌呤:(G+H)* 自由基和 (G+H)- 阴离子。
J Phys Chem A. 2006 Nov 2;110(43):12010-6. doi: 10.1021/jp0634454.
7
Stabilization of radical anion states of nucleobases in DNA.碱基在 DNA 中自由基阴离子态的稳定化。
Phys Chem Chem Phys. 2009 Dec 7;11(45):10608-13. doi: 10.1039/b910690a. Epub 2009 Aug 5.
8
Valence anions of 9-methylguanine-1-methylcytosine complexes. Computational and photoelectron spectroscopy studies.9-甲基鸟嘌呤-1-甲基胞嘧啶复合物的价态阴离子。计算和光电子能谱研究。
J Am Chem Soc. 2009 Feb 25;131(7):2663-9. doi: 10.1021/ja808313e.
9
Ab initio and DFT study of the geometric structures and static dipole (hyper)polarizabilities of aromatic anions.芳香族阴离子几何结构及静态偶极(超)极化率的从头算和密度泛函理论研究
J Phys Chem A. 2005 Nov 17;109(45):10380-7. doi: 10.1021/jp051136s.
10
On the bonding of first-row transition metal cations to guanine and adenine nucleobases.关于第一排过渡金属阳离子与鸟嘌呤和腺嘌呤核碱基的键合
J Phys Chem A. 2007 Oct 4;111(39):9823-9. doi: 10.1021/jp073858k. Epub 2007 Aug 31.

引用本文的文献

1
The hunt for reactive alkynes in bio-orthogonal click reactions: insights from mechanochemical and conceptual DFT calculations.生物正交点击反应中活性炔烃的探索:来自机械化学和概念性密度泛函理论计算的见解
Chem Sci. 2019 Dec 23;11(5):1431-1439. doi: 10.1039/c9sc04507d.
2
Theoretical basis for the stabilization of charges by radicals on electrified polymers.带电聚合物上自由基稳定电荷的理论基础。
Chem Sci. 2017 Mar 1;8(3):2025-2032. doi: 10.1039/c6sc02672a. Epub 2016 Nov 23.