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北海古菌的时空分布变化与环境变量的关系。

Variations in spatial and temporal distribution of Archaea in the North Sea in relation to environmental variables.

作者信息

Herfort Lydie, Schouten Stefan, Abbas Ben, Veldhuis Marcel J W, Coolen Marco J L, Wuchter Cornelia, Boon Jan P, Herndl Gerhard J, Sinninghe Damsté Jaap S

机构信息

Department of Marine Biogeochemistry and Toxicology, Royal Netherlands Institute for Sea Research (NIOZ), Texel, The Netherlands.

出版信息

FEMS Microbiol Ecol. 2007 Dec;62(3):242-57. doi: 10.1111/j.1574-6941.2007.00397.x.

Abstract

The spatial and temporal distribution of pelagic Archaea was studied in the southern North Sea by rRNA hybridization, sequencing and quantification of 16S rRNA gene and membrane lipid analyses and related to physical, chemical and biological parameters to determine the factors influencing archaeal biogeography. A clear temporal variability was observed, with marine Crenarchaeota (Group I.1a) being relatively more abundant in winter and Euryarchaeota dominating the archaeal assemblage in spring and summer. Spatial differences in the lateral distribution of Crenarchaeota were also evident. In fact, their abundance was positively correlated with the copy number of the gene encoding the alpha subunit of crenarchaeotal ammonia monooxygenase (amoA) and with concentrations of ammonia, nitrate, nitrite and phosphorus. This suggests that most Crenarchaeota in the North Sea are nitrifiers and that their distribution is determined by nutrient concentrations. However, Crenarchaeota were not abundant when larger phytoplankton (>3 microm) dominated the algal population. It is hypothesized that together with nutrient concentration, phytoplankton biomass and community structure can predict crenarchaeotal abundance in the southern North Sea. Euryarchaeotal abundance was positively correlated with chlorophyll a concentrations, but not with phytoplankton community structure. Whether this is related to the potential of Euryarchaeota to perform aerobic anoxygenic phototrophy remains to be shown, but the conspicuous seasonal distribution pattern of Crenarchaeota and Euryarchaeota suggests that they occupy a different ecological niche.

摘要

通过16S rRNA基因的rRNA杂交、测序和定量分析以及膜脂分析,研究了北海南部浮游古菌的时空分布,并将其与物理、化学和生物学参数相关联,以确定影响古菌生物地理学的因素。观察到明显的时间变异性,海洋泉古菌(第I.1a组)在冬季相对更为丰富,而广古菌在春季和夏季主导古菌群落。泉古菌横向分布的空间差异也很明显。事实上,它们的丰度与编码泉古菌氨单加氧酶(amoA)α亚基的基因拷贝数以及氨、硝酸盐、亚硝酸盐和磷的浓度呈正相关。这表明北海中的大多数泉古菌是硝化菌,其分布由营养物浓度决定。然而,当较大的浮游植物(>3微米)在藻类种群中占主导地位时,泉古菌并不丰富。据推测,浮游植物生物量和群落结构与营养物浓度一起可以预测北海南部泉古菌的丰度。广古菌的丰度与叶绿素a浓度呈正相关,但与浮游植物群落结构无关。这是否与广古菌进行有氧无氧光合作用的潜力有关还有待证明,但泉古菌和广古菌明显的季节分布模式表明它们占据不同的生态位。

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